RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 AIDAQ96BJ3 306 aa19.29■□□□□ 0.68
UPK3A-201ENST00000216211 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
UPK3A-201ENST00000216211 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
UPK3A-201ENST00000216211 ECE2O60344 883 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 IGKV5-2P06315 115 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 PAXIP1Q6ZW49 1069 aaPredicted RBP19.28■□□□□ 0.68
UPK3A-201ENST00000216211 MICALL2Q8IY33 904 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 KCNQ5Q9NR82 932 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
UPK3A-201ENST00000216211 H7C1D1 291 aa19.27■□□□□ 0.68
UPK3A-201ENST00000216211 G2E3Q7L622 706 aa19.27■□□□□ 0.68
UPK3A-201ENST00000216211 WBP1LQ9NX94 342 aa19.27■□□□□ 0.68
UPK3A-201ENST00000216211 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
UPK3A-201ENST00000216211 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
UPK3A-201ENST00000216211 UFL1O94874 794 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 GRM1Q13255 1194 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 ZC3H15Q8WU90 426 aaKnown RBP19.26■□□□□ 0.67
UPK3A-201ENST00000216211 DPF2Q92785 391 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
UPK3A-201ENST00000216211 TLL2Q9Y6L7 1015 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 RTL9Q8NET4 1388 aa19.26■□□□□ 0.67
UPK3A-201ENST00000216211 IL16Q14005 1332 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 ANP32CO43423 234 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 CELF2O95319 508 aaKnown RBP19.25■□□□□ 0.67
UPK3A-201ENST00000216211 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
UPK3A-201ENST00000216211 SAMD7Q7Z3H4 446 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 ANKRD18AQ8IVF6 992 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 CAPNS2Q96L46 248 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 ZNF408Q9H9D4 720 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 GGA1Q9UJY5 639 aa19.25■□□□□ 0.67
UPK3A-201ENST00000216211 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-201ENST00000216211 G3V3G9 751 aa19.24■□□□□ 0.67
UPK3A-201ENST00000216211 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
UPK3A-201ENST00000216211 CTSWP56202 376 aa19.24■□□□□ 0.67
UPK3A-201ENST00000216211 TBC1D10BQ4KMP7 808 aaPredicted RBP19.24■□□□□ 0.67
UPK3A-201ENST00000216211 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
UPK3A-201ENST00000216211 NEURL1BA8MQ27 555 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 EGFRP00533 1210 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 ECE1P42892 770 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 CDC37L1Q7L3B6 337 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
UPK3A-201ENST00000216211 RPS12P25398 132 aaKnown RBP19.22■□□□□ 0.67
UPK3A-201ENST00000216211 LBX1P52954 281 aa19.22■□□□□ 0.67
UPK3A-201ENST00000216211 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
UPK3A-201ENST00000216211 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
UPK3A-201ENST00000216211 RBM26Q5T8P6 1007 aaKnown RBP19.22■□□□□ 0.67
UPK3A-201ENST00000216211 SAPCD2Q86UD0 394 aa19.22■□□□□ 0.67
UPK3A-201ENST00000216211 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
UPK3A-201ENST00000216211 TTLL11Q8NHH1 800 aa19.22■□□□□ 0.67
UPK3A-201ENST00000216211 XDHP47989 1333 aa19.22■□□□□ 0.67
UPK3A-201ENST00000216211 DLK2Q6UY11 383 aa19.21■□□□□ 0.67
UPK3A-201ENST00000216211 CDC5LQ99459 802 aaKnown RBP19.21■□□□□ 0.67
UPK3A-201ENST00000216211 GREM2Q9H772 168 aa19.21■□□□□ 0.67
UPK3A-201ENST00000216211 ZNF646O15015 1829 aaPredicted RBP19.21■□□□□ 0.67
UPK3A-201ENST00000216211 AOC2O75106 756 aa19.2■□□□□ 0.66
UPK3A-201ENST00000216211 VIL1P09327 827 aaKnown RBP19.2■□□□□ 0.66
UPK3A-201ENST00000216211 HSPA8P11142 646 aaKnown RBP19.2■□□□□ 0.66
UPK3A-201ENST00000216211 FLIIQ13045 1269 aa19.2■□□□□ 0.66
UPK3A-201ENST00000216211 UBE3BQ7Z3V4 1068 aa19.2■□□□□ 0.66
UPK3A-201ENST00000216211 WTIPA6NIX2 430 aaPredicted RBP19.19■□□□□ 0.66
UPK3A-201ENST00000216211 H7C1W4 665 aa19.19■□□□□ 0.66
UPK3A-201ENST00000216211 ATP2B4P23634 1241 aa19.19■□□□□ 0.66
UPK3A-201ENST00000216211 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
UPK3A-201ENST00000216211 VAMP4O75379 141 aa19.18■□□□□ 0.66
UPK3A-201ENST00000216211 EXOSC9Q06265 439 aaKnown RBP19.18■□□□□ 0.66
UPK3A-201ENST00000216211 GCKRQ14397 625 aa19.18■□□□□ 0.66
UPK3A-201ENST00000216211 KIF4BQ2VIQ3 1234 aa19.18■□□□□ 0.66
UPK3A-201ENST00000216211 WDR63Q8IWG1 891 aa19.18■□□□□ 0.66
UPK3A-201ENST00000216211 BSDC1Q9NW68 430 aaPredicted RBP19.18■□□□□ 0.66
UPK3A-201ENST00000216211 MINPP1Q9UNW1 487 aa19.18■□□□□ 0.66
UPK3A-201ENST00000216211 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
UPK3A-201ENST00000216211 KRT26Q7Z3Y9 468 aa19.17■□□□□ 0.66
UPK3A-201ENST00000216211 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
UPK3A-201ENST00000216211 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
UPK3A-201ENST00000216211 ADM5C9JUS6 153 aa19.16■□□□□ 0.66
UPK3A-201ENST00000216211 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
UPK3A-201ENST00000216211 HHIPL1Q96JK4 782 aa19.16■□□□□ 0.66
UPK3A-201ENST00000216211 BEGAINQ9BUH8 593 aa19.16■□□□□ 0.66
UPK3A-201ENST00000216211 ZNF609O15014 1411 aa19.16■□□□□ 0.66
UPK3A-201ENST00000216211 MAP2K2P36507 400 aa19.15■□□□□ 0.66
UPK3A-201ENST00000216211 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
UPK3A-201ENST00000216211 MYH16Q9H6N6 1097 aa19.15■□□□□ 0.66
UPK3A-201ENST00000216211 SPINK5Q9NQ38 1064 aaPredicted RBP19.15■□□□□ 0.66
UPK3A-201ENST00000216211 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
UPK3A-201ENST00000216211 MED23Q9ULK4 1368 aa19.15■□□□□ 0.66
UPK3A-201ENST00000216211 IGHMBP2P38935 993 aaKnown RBP19.14■□□□□ 0.65
UPK3A-201ENST00000216211 CASP7P55210 303 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 PODNQ7Z5L7 613 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 AGBL3Q8NEM8 1001 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 LINS1Q8NG48 757 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 GGA3Q9NZ52 723 aa19.14■□□□□ 0.65
UPK3A-201ENST00000216211 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms