RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 CNTROBQ8N137 903 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 RILPL2Q969X0 211 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 MCCP23508 829 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 DDX54Q8TDD1 881 aaKnown RBP12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
APOBEC3D-201ENST00000216099 CASP7P55210 303 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 TMTC2Q8N394 836 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 MYH3P11055 1940 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 PA2G4Q9UQ80 394 aaKnown RBP12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
APOBEC3D-201ENST00000216099 ST18O60284 1047 aa12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 SASH1O94885 1247 aa12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 IFIT2P09913 472 aaKnown RBP12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
APOBEC3D-201ENST00000216099 NUP98P52948 1817 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 H7C1W4 665 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 RREB1Q92766 1687 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 BCL9O00512 1426 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 PHLDB3Q6NSJ2 640 aa12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 SECISBP2LQ93073 1101 aaKnown RBP12.78□□□□□ -0.36
APOBEC3D-201ENST00000216099 SGSM2O43147 1006 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 MCM2P49736 904 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 A0A087WZG4 1122 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 CAMK2BQ13554 666 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 AACSQ86V21 672 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3D-201ENST00000216099 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 A1BGP04217 495 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 MCM4P33991 863 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 ANO2Q9NQ90 1003 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
APOBEC3D-201ENST00000216099 RAD50Q92878 1312 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 HIP1O00291 1037 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 PIGBQ92521 554 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 HSPA4P34932 840 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 FOXO4P98177 505 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
APOBEC3D-201ENST00000216099 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 RFC5P40937 340 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 TRIM28Q13263 835 aaKnown RBP12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
APOBEC3D-201ENST00000216099 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 MFSD10Q14728 455 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 STARD3NLO95772 234 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 PTMSP20962 102 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 CLEC17AQ6ZS10 378 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
APOBEC3D-201ENST00000216099 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 EXOC5O00471 708 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 DHX38Q92620 1227 aaKnown RBP12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 SIL1Q9H173 461 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 IL25Q9H293 177 aa12.72□□□□□ -0.37
APOBEC3D-201ENST00000216099 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms