RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Wdr93Q402B2 695 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ubxn1Q922Y1 297 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gm7347D3YYI9 267 aa17.27■□□□□ 0.35
Col2a1-201ENSMUST00000023123 DesP31001 469 aaKnown RBP17.27■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ebag9Q9D0V7 213 aa17.27■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Rassf2Q8BMS9 326 aa17.27■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ms4a1P19437 291 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Cers3Q1A3B0 383 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ccdc82Q6PG04 518 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Vps36Q91XD6 386 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pet2A2AHY8 747 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 PdiltQ9DAN1 588 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Lmbr1lQ9D1E5 489 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ranbp6Q8BIV3 1105 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Syce1Q9D495 329 aa17.26■□□□□ 0.35
Col2a1-201ENSMUST00000023123 PxdnQ3UQ28 1475 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Serpinc1P32261 465 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pank2Q3U4S0 443 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pde3aQ9Z0X4 1141 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 AI481877A2ALV5 1481 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Diaph1O08808 1255 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 GptQ8QZR5 496 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 ParvgQ9ERD8 331 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Asic1Q6NXK8 526 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 GnaqP21279 359 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gbp2Q9Z0E6 589 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 TnnQ80Z71 1560 aa17.25■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Sbno1Q689Z5 1390 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Igbp1Q61249 340 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ankrd50F7BE84 1390 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 DlatQ8BMF4 642 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Golga5Q9QYE6 729 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pla2r1Q62028 1487 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ccdc6D3YZP9 469 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Bicd1Q8BR07 835 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 NsmfQ99NF2 532 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Cep19Q9CQA8 163 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Thoc2B1AZI6 1594 aaKnown RBP17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ccdc170D3YXL0 722 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Slc1a4O35874 532 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Arhgef6Q8K4I3 771 aa17.24■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Mdm2P23804 489 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Tsga10Q6NY15 697 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Tacc2Q9JJG0 1149 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Znf568E9PYI1 671 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Zfpm1O35615 995 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Tnip1Q9WUU8 647 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ier5O89113 308 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 CalcaP70160 136 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Krt7Q9DCV7 457 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gucy1a3Q9ERL9 691 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Zfp213E9QAW0 468 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 SsbP32067 415 aaKnown RBP17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Atp2b3Q0VF55 1220 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Slf2Q6P9P0 1278 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gigyf2Q6Y7W8 1291 aaKnown RBP17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gys2Q8VCB3 704 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Tex19.1Q99MV2 351 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Tmco5aQ9D9D5 303 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pik3ap1Q9EQ32 811 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Zmym3Q9JLM4 1370 aa17.23■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Samd9lQ69Z37 1561 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Eftud2O08810 971 aaKnown RBP17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Map3k7clP58500 142 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Cyp7a1Q64505 503 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Dpf1Q9QX66 387 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Taf7Q9R1C0 341 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ces1aE9PYP1 563 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Spa17Q62252 149 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Plcd1Q8R3B1 756 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gm1993A6X8I0 212 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 SlxD3Z347 212 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Plcd3Q8K2J0 785 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Sept14Q9DA97 430 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Dennd3A2RT67 1274 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 MarcksP26645 309 aaKnown RBP17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ttc12Q8BW49 704 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Dclk3Q8BWQ5 790 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Taok3Q8BYC6 898 aa17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ythdc2B2RR83 1445 aaKnown RBP17.22■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Gapvd1Q6PAR5 1458 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Fancd2Q80V62 1450 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Arhgef12Q8R4H2 1543 aaKnown RBP17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Smarcc2Q6PDG5 1213 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Terf2ipQ91VL8 393 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Cnpy2Q9QXT0 182 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Maip1Q8BHE8 291 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Rsph10bE9PYQ0 876 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Pa2g4P50580 394 aaKnown RBP17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Dact3Q0PHV7 610 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Asic3Q6X1Y6 530 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Ift74Q8BKE9 600 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Adcy3Q8VHH7 1145 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Atp12aQ9Z1W8 1035 aa17.21■□□□□ 0.35
Col2a1-201ENSMUST00000023123 Atp2b1G5E829 1220 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Myo1bP46735 1107 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Ccdc57Q6PHN1 1016 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Lrsam1Q80ZI6 727 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 Rapgef3Q8VCC8 918 aa17.21■□□□□ 0.34
Col2a1-201ENSMUST00000023123 NapgQ9CWZ7 312 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms