RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ALKBH3Q96Q83 286 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 FOXB1Q99853 325 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 RERGLQ9H628 205 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 KCNJ16Q9NPI9 418 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 NBASA2RRP1 2371 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 CIB4A0PJX0 185 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 J3QKU1 62 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 ZG16O60844 167 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 ENTPD6O75354 484 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 WBP4O75554 376 aaKnown RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 CLDN14O95500 239 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 HRGP04196 525 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 GYPBP06028 91 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 PSMB1P20618 241 aaKnown RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 FMO3P31513 532 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 PYCR1P32322 319 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 CD79BP40259 229 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 HSF2Q03933 536 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 APOFQ13790 326 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 GABRA6Q16445 453 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 FAM27BQ5VT28 67 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 OR7E24Q6IFN5 339 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 ANKRD16Q6P6B7 361 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 STAC2Q6ZMT1 411 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 BCDIN3DQ7Z5W3 292 aaKnown RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 CXorf67Q86X51 503 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 PROKR2Q8NFJ6 384 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 OR1K1Q8NGR3 316 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 APH1BQ8WW43 257 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 BCL2L2Q92843 193 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 OR10A4Q9H209 315 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 NELFAQ9H3P2 528 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 MARCH7Q9H992 704 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 SEC61A2Q9H9S3 476 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 TMEM38BQ9NVV0 291 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 HAO2Q9NYQ3 351 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 AASSQ9UDR5 926 aa10.82□□□□□ -0.68
LINC00339-213ENST00000642137 WARS2Q9UGM6 360 aaKnown RBP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00339-213ENST00000642137 A0A1W2PPL8 197 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 FAM171A2A8MVW0 826 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
LINC00339-213ENST00000642137 OR8G3PP0DMU2 310 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 HTR1FP30939 366 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 CDH11P55287 796 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 CXCR4P61073 352 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 LSM6P62312 80 aaKnown RBP10.81□□□□□ -0.68
LINC00339-213ENST00000642137 CSNK2BP67870 215 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 SGCAQ16586 387 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 LCN1P1Q5VSP4 162 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 C9orf135Q5VTT2 229 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 ZNF813Q6ZN06 617 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 CCDC36Q8IYA8 594 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 SLC22A24Q8N4F4 322 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 OR51L1Q8NGJ5 315 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 RNASE6Q93091 150 aaKnown RBP10.81□□□□□ -0.68
LINC00339-213ENST00000642137 NABP1Q96AH0 204 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 WACQ9BTA9 647 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 DNAJC27Q9NZQ0 273 aa10.81□□□□□ -0.68
LINC00339-213ENST00000642137 RPL36Q9Y3U8 105 aaKnown RBP10.81□□□□□ -0.68
LINC00339-213ENST00000642137 DIDO1Q9BTC0 2240 aaKnown RBP10.81□□□□□ -0.68
LINC00339-213ENST00000642137 HIVEP3Q5T1R4 2406 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 FAM90A27PA6NNH2 459 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 C16orf97H3BN30 126 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 PYCARD-AS1I3L0S3 204 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 LYZL6O75951 148 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 HLA-DQA2P01906 255 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 TFP02787 698 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 SCG5P05408 212 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 GAAP10253 952 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 ZNF823P16415 610 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 PAX7P23759 505 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 GSTT1P30711 240 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 CDAP32320 146 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
LINC00339-213ENST00000642137 MED21Q13503 144 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 GGTLC2Q14390 218 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 CDSNQ15517 529 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 TEX30Q5JUR7 227 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 C6orf141Q5SZD1 244 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 BHLHA15Q7RTS1 189 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-213ENST00000642137 P2RY8Q86VZ1 359 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 C17orf78Q8N4C9 275 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 STEAP2Q8NFT2 490 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
LINC00339-213ENST00000642137 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms