RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CLRN1P58418 232 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 SRYQ05066 204 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 FMODQ06828 376 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 SLC17A1Q14916 467 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ETFDHQ16134 617 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 BCL2A1Q16548 175 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 CTF1Q16619 201 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 CARD17Q5XLA6 110 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 SSX6Q7RTT6 188 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 KLBQ86Z14 1044 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 NOXO1Q8NFA2 376 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ROBO4Q8WZ75 1007 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 SLC25A44Q96H78 314 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF845Q96IR2 970 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 INTS14Q96SY0 518 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 SF3B5Q9BWJ5 86 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 MRPL13Q9BYD1 178 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 LDAHQ9H6V9 325 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 EXO5Q9H790 373 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 MARCH7Q9H992 704 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 COPS3Q9UNS2 423 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 COA3Q9Y2R0 106 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 PCDHGA9Q9Y5G4 932 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 TRGV5A0A0B4J1U4 118 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 J3QLW9 94 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 TFECO14948 347 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 AIREO43918 545 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 LALBAP00709 142 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 MT-ND5P03915 603 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 PGA4P0DJD7 388 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 PGA3P0DJD8 388 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 CPEP16870 476 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF19P17023 458 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 PTGS2P35354 604 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 RPS3AP61247 264 aaKnown RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 LSM3P62310 102 aaKnown RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 HSF2Q03933 536 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 ACSM1Q08AH1 577 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 AQP6Q13520 282 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 TPBGQ13641 420 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 THEM4Q5T1C6 240 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 LIPKQ5VXJ0 399 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 VASNQ6EMK4 673 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 ABLIM2Q6H8Q1 611 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 CDC20BQ86Y33 519 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 OR6N2Q8NGY6 317 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 NEIL3Q8TAT5 605 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 UFD1Q92890 307 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 RPL3LQ92901 407 aaKnown RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 CPNE4Q96A23 557 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
PHGDH-221ENST00000641573 C4orf36Q96KX1 117 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 FOXN4Q96NZ1 517 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 TTTY10Q9BZA0 68 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 WDR76Q9H967 626 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 PTTG2Q9NZH5 202 aa11.64□□□□□ -0.55
PHGDH-221ENST00000641573 IGKV1D-43A0A0B4J1Z2 117 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 TRIM64BA6NI03 449 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF716A6NP11 495 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 CENPBD1B2RD01 187 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 K7EM74 188 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 AKAP8O43823 692 aaKnown RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF24P17028 368 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 PCSK6P29122 969 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 CAPZA2P47755 286 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 OR12D2P58182 307 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ACTA2P62736 377 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ACTG2P63267 376 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 BDH1Q02338 343 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 GLO1Q04760 184 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF169Q14929 603 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 CDONQ4KMG0 1287 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 TP53I3Q53FA7 332 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 SLC25A47Q6Q0C1 308 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 PHC2Q8IXK0 858 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ALDH16A1Q8IZ83 802 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 SYS1Q8N2H4 156 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZFP41Q8N8Y5 198 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZIC4Q8N9L1 334 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 SNX33Q8WV41 574 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 NSMAFQ92636 917 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF385AQ96PM9 386 aaKnown RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 MYCBPQ99417 103 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 MNTQ99583 582 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 OR51E2Q9H255 320 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
PHGDH-221ENST00000641573 NDUFB11Q9NX14 153 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 KLHDC2Q9Y2U9 406 aa11.63□□□□□ -0.55
PHGDH-221ENST00000641573 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms