RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ZNF813Q6ZN06 617 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 COMMD7Q86VX2 200 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF695Q8IW36 515 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 KCND3Q9UK17 655 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 PCDHGA1Q9Y5H4 931 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 A0A1W2PNR3 127 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 ANKRD61A6NGH8 418 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 K7EQS6 105 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 SERPINE2P07093 398 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 CLDN6P56747 220 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 GPR176Q14439 515 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 ZNF546Q86UE3 836 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 OR13C5Q8NGS8 318 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 SNX18Q96RF0 628 aa16.03■□□□□ 0.16
SCARB2-223ENST00000640640 EIF5A2Q9GZV4 153 aaKnown RBP16.03■□□□□ 0.16
SCARB2-223ENST00000640640 MRPS2Q9Y399 296 aaKnown RBP16.03■□□□□ 0.16
SCARB2-223ENST00000640640 NPIPB8E9PQR5 432 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 PRKACBP22694 351 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 GPR3P46089 330 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 MECP2P51608 486 aaKnown RBP16.02■□□□□ 0.16
SCARB2-223ENST00000640640 SIRT6Q8N6T7 355 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 HSD17B8Q92506 261 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 ISG20L2Q9H9L3 353 aaKnown RBP16.02■□□□□ 0.16
SCARB2-223ENST00000640640 ZDBF2Q9HCK1 2354 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 TGM4P49221 684 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 SF3B4Q15427 424 aaKnown RBP eCLIP16.02■□□□□ 0.16
SCARB2-223ENST00000640640 FER1L6-AS2Q96M78 137 aa16.02■□□□□ 0.16
SCARB2-223ENST00000640640 SLC33A1O00400 549 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-223ENST00000640640 RAC2P15153 192 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 ASAH1Q13510 395 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 GK2Q14410 553 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-223ENST00000640640 ADGRE4PQ86SQ3 457 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 C10orf111Q8N326 155 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 DNAAF1Q8NEP3 725 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 OR4Q3Q8NH05 313 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-223ENST00000640640 SLC7A6Q92536 515 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 PCED1AQ9H1Q7 454 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 SLCO5A1Q9H2Y9 848 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 AKIP1Q9NQ31 210 aa16.02■□□□□ 0.15
SCARB2-223ENST00000640640 TRAPPC2LH3BP13 241 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 VAMP5O95183 116 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 HOXB5P09067 269 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 HOXD12P35452 270 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 TMPRSS11FQ6ZWK6 438 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 PPA2Q9H2U2 334 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 BOLA1Q9Y3E2 137 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 CACNA1IQ9P0X4 2223 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 SRP9P49458 86 aaKnown RBP16.01■□□□□ 0.15
SCARB2-223ENST00000640640 EVX1P49640 407 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 CASP6P55212 293 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 TAS2R46P59540 309 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 MESP2Q0VG99 397 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 UBALD2Q8IYN6 164 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 CALHM2Q9HA72 323 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 MAP2K6P52564 334 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 RDH10Q8IZV5 341 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 RBM38Q9H0Z9 239 aaKnown RBP16.01■□□□□ 0.15
SCARB2-223ENST00000640640 MED29Q9NX70 200 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 SIGLEC7Q9Y286 467 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 A0A087WUJ7 227 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 CX3CR1P49238 355 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 GPR85P60893 370 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 ZIC1Q15915 447 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 ZNF684Q5T5D7 378 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 TMEM81Q6P7N7 255 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 PGAP1Q75T13 922 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 ANGPTL5Q86XS5 388 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 ZNF679Q8IYX0 411 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 MAML2Q8IZL2 1156 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-223ENST00000640640 DEFB123Q8N688 67 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 CADM4Q8NFZ8 388 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 PPP1R35Q8TAP8 253 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 ASH2LQ9UBL3 628 aa16.01■□□□□ 0.15
SCARB2-223ENST00000640640 LOC107986453A0A1B0GWG9 222 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 ABHD16AO95870 558 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 IRF2P14316 349 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 RNF4P78317 190 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 CORO6Q6QEF8 472 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 C17orf50Q8WW18 174 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 IL1F10Q8WWZ1 152 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 DVL3Q92997 716 aaPredicted RBP16■□□□□ 0.15
SCARB2-223ENST00000640640 IGHV5-51A0A0C4DH38 117 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 PRSS37A4D1T9 235 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 GABARAPH6UMI1 98 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 OR2J2O76002 312 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 ACHEP22303 614 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 CAMLGP49069 296 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 CDK5Q00535 292 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 SLC9A3R2Q15599 337 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 ZNF628Q5EBL2 1059 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 ZNF585AQ6P3V2 769 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 WWTR1Q9GZV5 400 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 TXNIPQ9H3M7 391 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 RAB22AQ9UL26 194 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 A0A0B4J2E0 115 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 A0A1B0GX12 115 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 GREM1O60565 184 aa16■□□□□ 0.15
SCARB2-223ENST00000640640 IGHA2P01877 340 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms