RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 LGI3Q8N145 548 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 ZBTB44Q8NCP5 570 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 OR51A4Q8NGJ6 313 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 RHNO1Q9BSD3 238 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 PLK3Q9H4B4 646 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 HRH3Q9Y5N1 445 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 NME2P1O60361 137 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 RFX2P48378 723 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 ZNF133P52736 654 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-213ENST00000638680 YPEL5P62699 121 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 PRSS35Q8N3Z0 413 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 SLC35A4Q96G79 324 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 DHCR7Q9UBM7 475 aaKnown RBP16.97■□□□□ 0.31
SCARB2-213ENST00000638680 A8MVM7 634 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 OR2F2O95006 317 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 HLA-HP01893 362 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 HPNP05981 417 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 OR2F1Q13607 317 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 DHRS4L2Q6PKH6 230 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 RHBDD1Q8TEB9 315 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 MITD1Q8WV92 249 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 MS4A4AQ96JQ5 239 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 A0A0B4J203 849 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 MAGEB4O15481 346 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 ZIC2O95409 532 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 F2RL1P55085 397 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 EXOSC2Q13868 293 aaKnown RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 C1orf140Q5VVS0 124 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 DPPA2Q7Z7J5 298 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 BSCL2Q96G97 398 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 UQCC2Q9BRT2 126 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 G3V3Y1 287 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 HIST1H1CP16403 213 aaKnown RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 EPHA5P54756 1037 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 PDZD11Q5EBL8 140 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 NKAIN2Q5VXU1 208 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 C17orf107Q6ZR85 190 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 R3HDMLQ9H3Y0 253 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 PLSCR3Q9NRY6 295 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 HRO43593 1189 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 CTNSO60931 367 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SCO1O75880 301 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SLC2A1P11166 492 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 EVX1P49640 407 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 PSMB3P49720 205 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 ARHGAP11BQ3KRB8 267 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SLC25A32Q9H2D1 315 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SEMA6CQ9H3T2 930 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 TMEM231Q9H6L2 316 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 BOKQ9UMX3 212 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 OSGIN2Q9Y236 505 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 NOSIPQ9Y314 301 aaKnown RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 K7ESM1 405 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 TRHRP34981 398 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SOX18P35713 384 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 FLI1Q01543 452 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 OTUD1Q5VV17 481 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-213ENST00000638680 OR2L13Q8N349 312 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 MS4A6EQ96DS6 147 aa16.96■□□□□ 0.31
SCARB2-213ENST00000638680 SBK3P0C264 359 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 TMEM52BQ4KMG9 183 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 GABRG1Q8N1C3 465 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 ARV1Q9H2C2 271 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 HIF1ANQ9NWT6 349 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 MYOTQ9UBF9 498 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 RPL27P61353 136 aaKnown RBP16.95■□□□□ 0.3
SCARB2-213ENST00000638680 CDH26Q8IXH8 852 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 CMTM4Q8IZR5 234 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 LURAP1Q96LR2 239 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 CMC2Q9NRP2 79 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 GNG12Q9UBI6 72 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 HCFC2Q9Y5Z7 792 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 GFYI3L273 518 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 SNTB1Q13884 538 aaKnown RBP16.95■□□□□ 0.3
SCARB2-213ENST00000638680 FAM71CQ8NEG0 241 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 C10orf90Q96M02 699 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF75AQ96N20 296 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 TMEM184BQ9Y519 407 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-213ENST00000638680 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 RAB11AP62491 216 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 HABP2Q14520 560 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-213ENST00000638680 OR4N2Q8NGD1 307 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 BTF3L4Q96K17 158 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 SLC22A11Q9NSA0 550 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 ANKRD61A6NGH8 418 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 ACHEP22303 614 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 SLC6A12P48065 614 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 DUSP23Q9BVJ7 150 aa16.95■□□□□ 0.3
SCARB2-213ENST00000638680 OR2C1O95371 312 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 ZDHHC11BP0C7U3 371 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 ABOP16442 354 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 C1orf87Q8N0U7 546 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 RELL2Q8NC24 303 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-213ENST00000638680 NANPQ8TBE9 248 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 OR1E3Q8WZA6 343 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 B3GALT5Q9Y2C3 310 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 CHRM2P08172 466 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 SNCAP37840 140 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 FAHD1Q6P587 224 aa16.94■□□□□ 0.3
SCARB2-213ENST00000638680 FAM199XQ6PEV8 388 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms