RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	SLC26A10	Q8NG04	563 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	SMAP2	Q8WU79	429 aa	Predicted RBP	10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	GATAD2B	Q8WXI9	593 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	NSMAF	Q92636	917 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	YIPF6	Q96EC8	236 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	CALHM2	Q9HA72	323 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	GLRX2	Q9NS18	164 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	MRPL22	Q9NWU5	206 aa	Known RBP	10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	CEPT1	Q9Y6K0	416 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ASPM	Q8IZT6	3477 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	CHD8	Q9HCK8	2581 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	PIEZO2	Q9H5I5	2752 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	DHH	O43323	396 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	TMCC2	O75069	709 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	MRPL33	O75394	65 aa	Known RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	MT-ND5	P03915	603 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	SCG5	P05408	212 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	HSMCR30	P0CW71	290 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	GAA	P10253	952 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ALOX5AP	P20292	161 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	GUCA1A	P43080	201 aa	Predicted RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ENTPD1	P49961	510 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF84	P51523	738 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	MLLT11	Q13015	90 aa	Predicted RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	PCK2	Q16822	640 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	CDON	Q4KMG0	1287 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	PHYHD1	Q5SRE7	291 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	RIPPLY2	Q5TAB7	128 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	GPR107	Q5VW38	600 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	PLEKHG7	Q6ZR37	379 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	P4HA3	Q7Z4N8	544 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	TUSC5	Q8IXB3	177 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	SYS1	Q8N2H4	156 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	GPR137C	Q8N3F9	429 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF454	Q8N9F8	522 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	OR6N2	Q8NGY6	317 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	OTOS	Q8NHW6	89 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	SNX33	Q8WV41	574 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ASB17	Q8WXJ9	295 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	WNT2B	Q93097	391 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	FOXN4	Q96NZ1	517 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	LINC00470	Q9BZP3	86 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	RBM38	Q9H0Z9	239 aa	Known RBP	10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	BABAM2	Q9NXR7	383 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	LUZP4	Q9P127	313 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	CLCF1	Q9UBD9	225 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	KCNG2	Q9UJ96	466 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	LAMP5	Q9UJQ1	280 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823	ZGRF1	Q86YA3	2104 aa		10.42	□□□□□ -0.74
CLN6-223	ENST00000637823		A0A1W2PPL8	197 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CCDC160	A6NGH7	325 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823		J3QLW9	94 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF701	M0R085	212 aa	Predicted RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CCRL2	O00421	344 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	MPZL1	O95297	269 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TGM6	O95932	706 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TACSTD2	P09758	323 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	SFTPC	P11686	197 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CD36	P16671	472 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CPE	P16870	476 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF19	P17023	458 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	LIPA	P38571	399 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CD79B	P40259	229 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	RGS6	P49758	472 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TMBIM6	P55061	237 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ADAM8	P78325	824 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	BDH1	Q02338	343 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TPBG	Q13641	420 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	STK11	Q15831	433 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TST	Q16762	297 aa	Known RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	FOXB2	Q5VYV0	432 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	PLXDC2	Q6UX71	529 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	FOXL2NB	Q6ZUU3	175 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	SSX6	Q7RTT6	188 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	DPY19L4	Q7Z388	723 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	FGD2	Q7Z6J4	655 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ANKRD13B	Q86YJ7	626 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CISD2	Q8N5K1	135 aa	Known RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TEX19	Q8NA77	164 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	OR10H5	Q8NGA6	315 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	OR5M9	Q8NGP3	310 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CPT1C	Q8TCG5	803 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	THEM6	Q8WUY1	208 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	C11orf40	Q8WZ69	217 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	OPALIN	Q96PE5	141 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	TRIB1	Q96RU8	372 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	FUNDC2	Q9BWH2	189 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	CDADC1	Q9BWV3	514 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	RBM24	Q9BX46	236 aa	Known RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ULBP2	Q9BZM5	246 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	SLCO5A1	Q9H2Y9	848 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	ISG20L2	Q9H9L3	353 aa	Known RBP	10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	SEC61A2	Q9H9S3	476 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	COPS3	Q9UNS2	423 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	UGT2A1	Q9Y4X1	527 aa		10.41	□□□□□ -0.74
CLN6-223	ENST00000637823	METTL15	A6NJ78	407 aa		10.4	□□□□□ -0.74

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