RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
CACNA1A-244ENST00000637625 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
CACNA1A-244ENST00000637625 YARS2Q9Y2Z4 477 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-244ENST00000637625 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
CACNA1A-244ENST00000637625 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TP53I11O14683 189 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 HPP00738 406 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 CLEC3BP05452 202 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 CD63P08962 238 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 PAICSP22234 425 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 SLURP1P55000 103 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 MLF1P58340 268 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 ARF1P84077 181 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 SOWAHCQ53LP3 525 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 C1orf140Q5VVS0 124 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 DPY19L2P2Q6ZN68 376 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TMEM99Q8N816 258 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 OR2M3Q8NG83 312 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 OR4K17Q8NGC6 315 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 OR51E2Q9H255 320 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 A8MVM7 634 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 STMND1H3BQB6 276 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 LRRTM2O43300 516 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 AHSA1O95433 338 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 HIST1H2ABP04908 130 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TFPIP10646 304 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 GRPRP30550 384 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 RPS19P39019 145 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 PRPS1P60891 318 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 RPS3AP61247 264 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TMEM44Q2T9K0 475 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 PLPPR5Q32ZL2 321 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 LEG1Q6P5S2 330 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 SLC22A25Q6T423 547 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 HIST3H2AQ7L7L0 130 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 ST8SIA1Q92185 356 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 HIST1H2ACQ93077 130 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 ZMYND19Q96E35 227 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 ARL5BQ96KC2 179 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 SECISBP2Q96T21 854 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 RNF167Q9H6Y7 350 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 FKRPQ9H9S5 495 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 FGF20Q9NP95 211 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 SDHAF3Q9NRP4 125 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 ZNF229Q9UJW7 825 aa11.32□□□□□ -0.6
CACNA1A-244ENST00000637625 KNTC1P50748 2209 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 IRGMA1A4Y4 181 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 FAM90A22PA8MWA6 464 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 FAM90A12PA8MX19 464 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 SLC2A5P22732 501 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 AHCYP23526 432 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 RGS6P49758 472 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 HLXQ14774 488 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 SPHARQ15513 63 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 TGIF1Q15583 401 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 SSX1Q16384 188 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 MDGA2Q7Z553 956 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 ZFP41Q8N8Y5 198 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 LRRC75AQ8NAA5 344 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 OR10H4Q8NGA5 316 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 THOC3Q96J01 351 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 GPN2Q9H9Y4 310 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 KLHL21Q9UJP4 597 aa11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 ZNF346Q9UL40 294 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 RPH3AQ9Y2J0 694 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-244ENST00000637625 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 C12orf71A8MTZ7 269 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 AIREO43918 545 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 NPIPB7O75200 414 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 IGF2P01344 180 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 CD14P08571 375 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 NAA10P41227 235 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 NBL1P41271 181 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 CLK1P49759 484 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 OR7A5Q15622 319 aa11.3□□□□□ -0.6
CACNA1A-244ENST00000637625 LIPKQ5VXJ0 399 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms