RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ZNF264O43296 627 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 HTR2AP28223 471 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 LIPAP38571 399 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 CLK1P49759 484 aaKnown RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 TUBA1BP68363 451 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 RASGEF1BQ0VAM2 473 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 CBFBQ13951 182 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ZNF829Q3KNS6 432 aaPredicted RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 SYT14P1Q58G82 188 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ARMCX4Q5H9R4 360 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 RPL13AP3Q6NVV1 102 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ZNF620Q6ZNG0 422 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 TUBA1AQ71U36 451 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ZNF614Q8N883 585 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 BORCS5Q969J3 196 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 LRR1Q96L50 414 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 PLA2G12AQ9BZM1 189 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
CTSD-208ENST00000636843 CDH10Q9Y6N8 788 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 FREM1Q5H8C1 2179 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 ABCA1O95477 2261 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PRODHO43272 600 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 AIREO43918 545 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 CYTIPO60759 359 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 LYPD3O95274 346 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 RAB36O95755 333 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 HMGN1P05114 100 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 GKN3PP0CG01 181 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 UBL4AP11441 157 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PRG2P13727 222 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 ACVR1BP36896 505 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 CDKN1AP38936 164 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 RGS6P49758 472 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 ENTPD1P49961 510 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 RNF144AP50876 292 aaPredicted RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 VBP1P61758 197 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PRKCDQ05655 676 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 FAPQ12884 760 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PPA1Q15181 289 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 QPRTQ15274 297 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PGGHGQ32M88 737 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 NDUFAF6Q330K2 333 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 DTX2Q86UW9 622 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 TMCO5AQ8N6Q1 288 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 MAPK1IP1LQ8NDC0 245 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 OR8D4Q8NGM9 314 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 DYNC2LI1Q8TCX1 351 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 TMEM239Q8WW34 195 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 MGLLQ99685 303 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 TRAF4Q9BUZ4 470 aaPredicted RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 MND1Q9BWT6 205 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
CTSD-208ENST00000636843 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
CTSD-208ENST00000636843 SERINC4A6NH21 518 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 UNC119BA6NIH7 251 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 CHP2O43745 196 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 CD5LO43866 347 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 PIP5K1CO60331 668 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 LYZL6O75951 148 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 IGHV4-39P01824 125 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 RBM34P42696 430 aaKnown RBP11.09□□□□□ -0.63
CTSD-208ENST00000636843 GPR4P46093 362 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 CCR4P51679 360 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 RAB40BQ12829 278 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 MED22Q15528 200 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 STK11Q15831 433 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 DNM1P46Q6ZS02 220 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 USP43Q70EL4 1123 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 ATG4DQ86TL0 474 aaPredicted RBP11.09□□□□□ -0.63
CTSD-208ENST00000636843 LSMEM1Q8N8F7 131 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 OR2T33Q8NG76 320 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 NDNFQ8TB73 568 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 RFKQ969G6 155 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 ZNF524Q96C55 264 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 RADILQ96JH8 1075 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
CTSD-208ENST00000636843 FGF20Q9NP95 211 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms