RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF232Q9UNY5 417 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 DYNC2H1Q8NCM8 4307 aaKnown RBP15.13■□□□□ 0.01
CLN6-212ENST00000636020 DHHO43323 396 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 RIPK2O43353 540 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 IGHV4-59P01825 116 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 MMP7P09237 267 aaPredicted RBP15.12■□□□□ 0.01
CLN6-212ENST00000636020 BIDP55957 195 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 GNB2P62879 340 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 OXLD1Q5BKU9 147 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 ZMAT1Q5H9K5 638 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 SPANXN4Q5MJ08 99 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 MUC20Q8N307 709 aaPredicted RBP15.12■□□□□ 0.01
CLN6-212ENST00000636020 FITM2Q8N6M3 262 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 NUDT16L1Q9BRJ7 211 aaKnown RBP15.12■□□□□ 0.01
CLN6-212ENST00000636020 ASPNQ9BXN1 380 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 ARMC7Q9H6L4 198 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 MRPL39Q9NYK5 338 aaKnown RBP15.12■□□□□ 0.01
CLN6-212ENST00000636020 RPS6KB2Q9UBS0 482 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 BTNL2Q9UIR0 455 aa15.12■□□□□ 0.01
CLN6-212ENST00000636020 PLPP3O14495 311 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 COPEO14579 308 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 GPR37O15354 613 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 SERPINI2O75830 405 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 RPS2P15880 293 aaKnown RBP15.11■□□□□ 0.01
CLN6-212ENST00000636020 TNFRSF1AP19438 455 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 FUT4P22083 530 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 AHCYP23526 432 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 KLBQ86Z14 1044 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 OR6X1Q8NH79 312 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 SGCDQ92629 289 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 SLC35B4Q969S0 331 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 POM121L2Q96KW2 1035 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 MOGAT1Q96PD6 335 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 CALML5Q9NZT1 146 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 P2RX2Q9UBL9 471 aa15.11■□□□□ 0.01
CLN6-212ENST00000636020 EIF3KQ9UBQ5 218 aaKnown RBP15.11■□□□□ 0.01
CLN6-212ENST00000636020 A0A1B0GWA3 101 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 TSPAN9O75954 239 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 STOMP27105 288 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 ALDH3A1P30838 453 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 CRISP3P54108 245 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 BST1Q10588 318 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 NRN1LQ496H8 165 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 TTMPQ5BVD1 217 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 MTX3Q5HYI7 312 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 RPS26P11Q5JNZ5 115 aaPredicted RBP15.1■□□□□ 0.01
CLN6-212ENST00000636020 PABPC1L2AQ5JQF8 200 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
CLN6-212ENST00000636020 TRIML2Q8N7C3 387 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 LSMEM1Q8N8F7 131 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 PLEKHA8Q96JA3 519 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 WWC2-AS2Q96NR7 200 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 TMEM165Q9HC07 324 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 MIOXQ9UGB7 285 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 PPP1R3CQ9UQK1 317 aa15.1■□□□□ 0.01
CLN6-212ENST00000636020 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.1■□□□□ 0.01
CLN6-212ENST00000636020 ZNF816-ZNF321PA0A0X1KG74 233 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 H3BSA7 217 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 CDKN2CP42773 168 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 IER3P46695 156 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 PPP1CBP62140 327 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 HSF2Q03933 536 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 EGR3Q06889 387 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 PDCD4Q53EL6 469 aaKnown RBP15.09■□□□□ 0.01
CLN6-212ENST00000636020 SLC27A4Q6P1M0 643 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 CCBE1Q6UXH8 406 aaPredicted RBP15.09■□□□□ 0.01
CLN6-212ENST00000636020 UNQ6126/PRO20091Q6UXV3 157 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 GDPGP1Q6ZNW5 385 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 ZNF621Q6ZSS3 439 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 SLC38A5Q8WUX1 472 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 DNAJA4Q8WW22 397 aaPredicted RBP15.09■□□□□ 0.01
CLN6-212ENST00000636020 NEIL1Q96FI4 390 aaPredicted RBP15.09■□□□□ 0.01
CLN6-212ENST00000636020 ACOXLQ9NUZ1 547 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 IFT52Q9Y366 437 aa15.09■□□□□ 0.01
CLN6-212ENST00000636020 LOC100509620A0A075B734 347 aa15.08■□□□□ 0
CLN6-212ENST00000636020 CENPVL3A0A0U1RRI6 287 aa15.08■□□□□ 0
CLN6-212ENST00000636020 C5orf49A4QMS7 147 aa15.08■□□□□ 0
CLN6-212ENST00000636020 LRRN3E7EW58 273 aa15.08■□□□□ 0
CLN6-212ENST00000636020 BCHEP06276 602 aa15.08■□□□□ 0
CLN6-212ENST00000636020 QDPRP09417 244 aa15.08■□□□□ 0
CLN6-212ENST00000636020 TNFSF4P23510 183 aa15.08■□□□□ 0
CLN6-212ENST00000636020 HTR2AP28223 471 aa15.08■□□□□ 0
CLN6-212ENST00000636020 S100A3P33764 101 aa15.08■□□□□ 0
CLN6-212ENST00000636020 MVDP53602 400 aa15.08■□□□□ 0
CLN6-212ENST00000636020 DPY19L1Q2PZI1 675 aa15.08■□□□□ 0
CLN6-212ENST00000636020 ALG10BQ5I7T1 473 aa15.08■□□□□ 0
CLN6-212ENST00000636020 WDR93Q6P2C0 686 aa15.08■□□□□ 0
CLN6-212ENST00000636020 RFPL4BQ6ZWI9 263 aa15.08■□□□□ 0
CLN6-212ENST00000636020 SLC35D2Q76EJ3 337 aa15.08■□□□□ 0
CLN6-212ENST00000636020 LDLRAD3Q86YD5 345 aa15.08■□□□□ 0
CLN6-212ENST00000636020 HIPK4Q8NE63 616 aa15.08■□□□□ 0
CLN6-212ENST00000636020 ITLN1Q8WWA0 313 aa15.08■□□□□ 0
CLN6-212ENST00000636020 ZNF566Q969W8 418 aa15.08■□□□□ 0
CLN6-212ENST00000636020 SLC25A44Q96H78 314 aaPredicted RBP15.08■□□□□ 0
CLN6-212ENST00000636020 PANX1Q96RD7 426 aa15.08■□□□□ 0
CLN6-212ENST00000636020 EPYCQ99645 322 aa15.08■□□□□ 0
CLN6-212ENST00000636020 PCGF1Q9BSM1 259 aa15.08■□□□□ 0
CLN6-212ENST00000636020 AKTIPQ9H8T0 292 aa15.08■□□□□ 0
CLN6-212ENST00000636020 RAB21Q9UL25 225 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms