RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DQX1Q8TE96 717 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MAIP1Q8WWC4 291 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC5A11Q8WWX8 675 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PATE1Q8WXA2 126 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 OR1E3Q8WZA6 343 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NRGNQ92686 78 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FGF11Q92914 225 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SMARCD2Q92925 531 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM186Q96B77 213 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RPUSD4Q96CM3 377 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PDXPQ96GD0 296 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NRTNQ99748 197 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TSG101Q99816 390 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ARHGDIGQ99819 225 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC6A7Q99884 636 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 P2RY13Q9BPV8 354 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RASL11BQ9BPW5 248 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM175Q9BSA9 504 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FEM1AQ9BSK4 669 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FICDQ9BVA6 458 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CALN1Q9BXU9 219 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 DUSP16Q9BY84 665 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 GCOM2Q9BZD3 368 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ROGDIQ9GZN7 287 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR1EQ9GZS1 481 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 C1orf21Q9H246 121 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 BLZF1Q9H2G9 400 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 DPH5Q9H2P9 285 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 LINC00597Q9H2U6 94 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF385DQ9H6B1 395 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ECT2Q9H8V3 914 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC25A22Q9H936 323 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PSTPIP2Q9H939 334 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZFP14Q9HCL3 533 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SH2D2AQ9NP31 389 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ACP6Q9NPH0 428 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 AIG1Q9NVV5 245 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NINJ2Q9NZG7 142 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 AIPL1Q9NZN9 384 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ANKMY1Q9P2S6 941 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 DEC1Q9P2X7 70 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PISDQ9UG56 409 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MTRF1LQ9UGC7 380 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 DCDC2Q9UHG0 476 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NUFIP1Q9UHK0 495 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CTNNA3Q9UI47 895 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RIMS3Q9UJD0 308 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ANAPC7Q9UJX3 599 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF225Q9UK10 706 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MMP17Q9ULZ9 603 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ASF1AQ9Y294 204 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MFHAS1Q9Y4C4 1052 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 UGT2A1Q9Y4X1 527 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NEUROG3Q9Y4Z2 214 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 OARD1Q9Y530 152 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PCYT1BQ9Y5K3 369 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 V9GY05 133 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SPACA6W5XKT8 324 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 USP9YO00507 2555 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FBN2P35556 2912 aa0.71□□□□□ -2.29
SMARCB1-209ENST00000635578 PDZD2O15018 2839 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PLCE1Q9P212 2302 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TLN2Q9Y4G6 2542 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CADP27708 2225 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TRAV19A0A0A6YYK7 116 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LOC100131303A0A0U1RQF7 123 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A0U1RQV5 110 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1B0GUS0 222 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 GOLGA6L7A0A1B0GV03 622 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ESYT2A0FGR8 921 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 GSAPA4D1B5 854 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF222A6NCQ9 220 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 A6NIZ1 184 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 VSTM2BA6NLU5 285 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LRRIQ3A6PVS8 624 aaPredicted RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM166BA8MTA8 275 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 IDSB3KWA1 339 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 C11orf94C9JXX5 98 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 G3V4G9 280 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PANO1I0J062 215 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 J3QKU1 62 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 K7ERQ8 282 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 SDHDO14521 159 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CPLX1O14810 134 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 MAPK13O15264 365 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RAD51BO15315 384 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 POLR2DO15514 142 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 COCHO43405 550 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 EFNA2O43921 213 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 UGT1A9O60656 530 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TPST2O60704 377 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 SPAG7O75391 227 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ECI2O75521 394 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 DEXIO95424 95 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LALBAP00709 142 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 STATHP02808 62 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 APODP05090 189 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CTSLP07711 333 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 KRT7P08729 469 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF806P0C7X5 589 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms