RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 A0A1B0GVG6 124 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PRSS51A0A1B0GVH4 220 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PQLC2LA1A4F0 135 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 LILRA5A6NI73 299 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR11H12B2RN74 326 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ZNF587BE7ETH6 402 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NPIPA5E9PKD4 350 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NEDD8-MDP1E9PL57 170 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 K7EN84 100 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PSMD12O00232 456 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 IMPA2O14732 288 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PRKYO43930 277 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 HPGDSO60760 199 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SHOX2O60902 331 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 WISP2O76076 250 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SEC24AO95486 1093 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 KRT75O95678 551 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 WDPCPO95876 746 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CD160O95971 181 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 HPP00738 406 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 IGHG3P01860 377 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 C2P06681 752 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 GSTA1P08263 222 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PRSS56P0CW18 603 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CD59P13987 128 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 IMPDH1P20839 514 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 IDSP22304 550 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CA4P22748 312 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SLC6A1P30531 599 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 GPX4P36969 197 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 MATKP42679 507 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NSG1P42857 185 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 GNPDA1P46926 289 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 DAP3P51398 398 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 SGSHP51688 502 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 FUT6P51993 359 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 AP2S1P53680 142 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 DLX5P56178 289 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 UBE2MP61081 183 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 SEC61A1P61619 476 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 ESRRGP62508 458 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SRYQ05066 204 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ELAVL2Q12926 359 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 VGLL4Q14135 290 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ZIC1Q15915 447 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ISXQ2M1V0 245 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 KRTAP27-1Q3LI81 207 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ZNF672Q499Z4 452 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 DMKNQ6E0U4 476 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 RPL13AP3Q6NVV1 102 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NIPAL1Q6NVV3 410 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 FAM131AQ6UXB0 335 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.54□□□□□ -2
PSPC1-208ENST00000635562 CREB3L2Q70SY1 520 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NET1Q7Z628 596 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 PRUNE1Q86TP1 453 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 TMEM135Q86UB9 458 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 FBXL14Q8N1E6 418 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 MTURNQ8N3F0 131 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 LRRC18Q8N456 261 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 STX19Q8N4C7 294 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 MREGQ8N565 214 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 EMC1Q8N766 993 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CLDN22Q8N7P3 220 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 HSD17B11Q8NBQ5 300 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 RNF149Q8NC42 400 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 TMEM161BQ8NDZ6 487 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR11H1Q8NG94 326 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR10W1Q8NGF6 305 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR10X1Q8NGY0 326 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR6K3Q8NGY3 331 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR2T11Q8NH01 316 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 OR11H2Q8NH07 326 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SYNPRQ8TBG9 265 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PLPPR1Q8TBJ4 325 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 LRRC15Q8TF66 581 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 SLC38A5Q8WUX1 472 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ABTB1Q969K4 478 aaPredicted RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 UPRTQ96BW1 309 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CXorf40BQ96DE9 158 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 PDXPQ96GD0 296 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 TIMD4Q96H15 378 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 TMEM19Q96HH6 336 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ITCHQ96J02 903 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 MS4A14Q96JA4 679 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 POM121L2Q96KW2 1035 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ZNF597Q96LX8 424 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 TMEM56Q96MV1 263 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 ZNF285Q96NJ3 590 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 KCNA7Q96RP8 456 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 CNN2Q99439 309 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 SLC6A7Q99884 636 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 KIFC1Q9BW19 673 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 UBXN6Q9BZV1 441 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NAA50Q9GZZ1 169 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 CPVLQ9H3G5 476 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 BOLA2Q9H3K6 86 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 MFSD1Q9H3U5 465 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 DHX35Q9H5Z1 703 aaKnown RBP2.54□□□□□ -2
PSPC1-208ENST00000635562 NIPAL2Q9H841 368 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms