RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TMPRSS11FQ6ZWK6 438 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 TMEM99Q8N816 258 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 OR2AJ1Q8NGZ0 328 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 KTI12Q96EK9 354 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 EMC6Q9BV81 110 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CENPMQ9NSP4 180 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 A0A0B4J2E0 115 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 FAM240BA0A1B0GVZ2 78 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 A0A1B0GX12 115 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 LINC01387J3KSC0 135 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 GPR171O14626 319 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 PHYHO14832 338 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 NEURL1O76050 574 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 PYCR1P32322 319 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CSNK1A1P48729 337 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 AGFG1P52594 562 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 PUDPQ08623 228 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 DPY19L2P2Q6ZN68 376 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 TMPPEQ6ZT21 453 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 KISS1RQ969F8 398 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CMC2Q9NRP2 79 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 HDGFL3Q9Y3E1 203 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 TMEM72A0PK05 275 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 FAM171A2A8MVW0 826 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 ADAM11O75078 769 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 FCGR2AP12318 317 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CCNOP22674 350 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 GPR50Q13585 617 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 PLEKHN1Q494U1 663 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 CD163Q86VB7 1156 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 GDPD1Q8N9F7 314 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 OR4F15Q8NGB8 312 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 OR10D3Q8NH80 312 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 TM9SF2Q99805 663 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 ABCB9Q9NP78 766 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 C20orf141Q9NUB4 165 aa11.18□□□□□ -0.62
SYNGAP1-207ENST00000628646 A0A087WUJ7 227 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 DVL2O14641 736 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 OR7A10O76100 309 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 MRPL3P09001 348 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNF362Q5T0B9 420 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 C1QL3Q5VWW1 255 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNF441Q8N8Z8 693 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 CPT1CQ8TCG5 803 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ARL5BQ96KC2 179 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 NEDD4LQ96PU5 975 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 PARPBPQ9NWS1 579 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 PAQR5Q9NXK6 330 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ICAM5Q9UMF0 924 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 WDFY3Q8IZQ1 3526 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 BHLHE40O14503 412 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 BIDP55957 195 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 GTPBP8Q8N3Z3 284 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 LNX2Q8N448 690 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 HDHD5Q9BXW7 423 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 FAM183AA6NL82 134 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 MT-ATP6P00846 226 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 MAKP20794 623 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 RAB25P57735 213 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 SDR9C7Q8NEX9 313 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 C15orf40Q8WUR7 153 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ULBP2Q9BZM5 246 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 TCF7L1Q9HCS4 588 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 CHST11Q9NPF2 352 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 HINT3Q9NQE9 182 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 GNG8Q9UK08 70 aa11.17□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZC3H12DA2A288 527 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 H7C1C5 153 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 ZNHIT1O43257 154 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 CD2P06729 351 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 CELA3AP09093 270 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 CD53P19397 219 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 LCN6P62502 163 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 INSL4Q14641 139 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 SLC35D2Q76EJ3 337 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 CEACAM19Q7Z692 300 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 NR2C2APQ86WQ0 139 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 SLC37A3Q8NCC5 494 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 LSM14AQ8ND56 463 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 FNDC9Q8TBE3 224 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 FOXN4Q96NZ1 517 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 DEPPQ9NTK1 212 aa11.16□□□□□ -0.62
SYNGAP1-207ENST00000628646 MRPS7Q9Y2R9 242 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms