RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 ADAM19Q9H013 955 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 POFUT1Q9H488 388 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ACKR4Q9NPB9 350 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CHD7Q9P2D1 2997 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 C19orf53Q9UNZ5 99 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CACNA1IQ9P0X4 2223 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TRAV18A0A075B6X5 111 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TRAV20A0A0B4J274 112 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 A0A0B4J2A0 478 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 IGKV1-8A0A0C4DH67 115 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 LOC100289279A0A1B0GTE1 492 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 EDDM13A0A1B0GTR0 161 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PMS2P1A4D2B8 440 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TMEM212A6NML5 194 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 OR4C45A6NMZ5 311 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF729A6NN14 1252 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 OR2AT4A6NND4 320 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 GPR89AB7ZAQ6 455 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 C4orf51C9J302 202 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 F5H0A9 414 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 NPIPB9F8W1W9 429 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 MFNGO00587 321 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 LDB3O75112 727 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 KAT7O95251 611 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ABHD16AO95870 558 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 IGHV2-5P01817 119 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PRNPP04156 253 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CD5P06127 495 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 GLAP06280 429 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ANXA2P07355 339 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CD14P08571 375 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 GPR89BP0CG08 455 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SMIM10L1P0DMW3 83 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PSMB5P28074 263 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ABCD3P28288 659 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 BCL6P41182 706 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CX3CR1P49238 355 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CAV2P51636 162 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PRKXP51817 358 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CAPZA1P52907 286 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 UBE2MP61081 183 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 EIF5AP63241 154 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 EGR3Q06889 387 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 DHRS2Q13268 280 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF234Q14588 700 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PDGFRLQ15198 375 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TAF13Q15543 124 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 DUSP5Q16690 384 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TCEAL5Q5H9L2 206 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 DCST2Q5T1A1 773 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ATPAF1Q5TC12 328 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 FHL5Q5TD97 284 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 AWAT2Q6E213 333 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CORO6Q6QEF8 472 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ADAMTSL4Q6UY14 1074 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 MTSS1LQ765P7 747 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 FAM220AQ7Z4H9 259 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SPRED2Q7Z698 418 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 GRASPQ7Z6J2 395 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TMPRSS12Q86WS5 348 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PAQR4Q8N4S7 273 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CDRT4Q8N9R6 151 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 LINC01555Q8NAE3 123 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 OR4K13Q8NH42 304 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PPP1R1CQ8WVI7 109 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TCTEX1D2Q8WW35 142 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 LIPHQ8WWY8 451 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 MCHR2Q969V1 340 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 NXPE3Q969Y0 559 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 GAL3ST3Q96A11 431 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PTX4Q96A99 478 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SEH1LQ96EE3 360 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SMIM10Q96HG1 83 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TMEM41AQ96HV5 264 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SMIM8Q96KF7 97 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 HSPA12BQ96MM6 686 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ASB16Q96NS5 453 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 LRRC3BQ96PB8 259 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 OR5B2Q96R09 309 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TAAR9Q96RI9 348 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 COL25A1Q9BXS0 654 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SLC17A9Q9BYT1 436 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 COMMD4Q9H0A8 199 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SEC61A2Q9H9S3 476 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 MRPS30Q9NP92 439 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 NIT2Q9NQR4 276 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 CYTL1Q9NRR1 136 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SLC22A11Q9NSA0 550 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ASF1BQ9NVP2 202 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 APOBEC3BQ9UH17 382 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 SHPKQ9UHJ6 478 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF230Q9UIE0 474 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 NOP16Q9Y3C1 178 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 MRPS23Q9Y3D9 190 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 PRKAB1Q9Y478 270 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 TIMM10BQ9Y5J6 103 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 IER3IP1Q9Y5U9 82 aa3.78□□□□□ -1.8
PTP4A1-205ENST00000626021 HCFC2Q9Y5Z7 792 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms