RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SMCO1Q147U7 214 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 C11orf88Q6PI97 169 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 DNM1P46Q6ZS02 220 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ARMC10Q8N2F6 343 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ZNF676Q8N7Q3 588 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 DMBX1Q8NFW5 382 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 OR2AK2Q8NG84 335 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 BAHD1Q8TBE0 780 aaPredicted RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 CCDC74AQ96AQ1 378 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 GPX7Q96SL4 187 aaPredicted RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 CCDC3Q9BQI4 270 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 PAPOLGQ9BWT3 736 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 FKRPQ9H9S5 495 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 PRMT8Q9NR22 394 aaPredicted RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 MRM2Q9UI43 246 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 CFAP54Q96N23 3096 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 DOCK8Q8NF50 2099 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 TRBV5-5A0A0J9YX44 114 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 C2orf74A8MZ97 194 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 RDH16O75452 317 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 ZNF432O94892 652 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 GP1BAP07359 652 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 AQP2P41181 271 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 RPS4XP62701 263 aaKnown RBP7.9□□□□□ -1.15
VCL-207ENST00000624354 SLC36A1Q7Z2H8 476 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 KRT77Q7Z794 578 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 LRRTM1Q86UE6 522 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 RCBTB1Q8NDN9 531 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 RXFP4Q8TDU9 374 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 RNF166Q96A37 237 aaPredicted RBP7.9□□□□□ -1.15
VCL-207ENST00000624354 WDR92Q96MX6 357 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 GDE1Q9NZC3 331 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 STEAP1Q9UHE8 339 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 LAMP5Q9UJQ1 280 aa7.9□□□□□ -1.15
VCL-207ENST00000624354 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 SERINC4A6NH21 518 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ELOA3DA6NLF2 546 aaPredicted RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 GOSR2O14653 212 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 RAD1O60671 282 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 AKR7A3O95154 331 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 CD14P08571 375 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 S1PR1P21453 382 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 FCARP24071 287 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 MPGP29372 298 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 CAPZA1P52907 286 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 SLC25A1P53007 311 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 CTXN1P60606 82 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 NFATC4Q14934 902 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ELOA3BQ3SY89 546 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 MOB3CQ70IA8 216 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ELOA3Q8NG57 546 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 OR6N1Q8NGY5 312 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 GPR148Q8TDV2 347 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 TMEM106AQ96A25 262 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 C3orf49Q96BT1 292 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 VSTM2LQ96N03 204 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 BARX1Q9HBU1 254 aaPredicted RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 SRA1Q9HD15 236 aaKnown RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 ZNF346Q9UL40 294 aaKnown RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 OR10H1Q9Y4A9 318 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 GGT3PA6NGU5 568 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 NPIPB9F8W1W9 429 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 H0Y8X5 98 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 GTF2F2P13984 249 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 MGMTP16455 207 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ACHEP22303 614 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 UBE2MP61081 183 aaKnown RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 DLX2Q07687 328 aaPredicted RBP7.89□□□□□ -1.15
VCL-207ENST00000624354 PDZK1IP1Q13113 114 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 NNATQ16517 81 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 CSRP2Q16527 193 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ALG10Q5BKT4 473 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 ANKRD16Q6P6B7 361 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 TSSK4Q6SA08 328 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 SPACA7Q96KW9 195 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 TCEAL7Q9BRU2 100 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 STARD5Q9NSY2 213 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 LRIT1Q9P2V4 623 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 KLHDC2Q9Y2U9 406 aa7.89□□□□□ -1.15
VCL-207ENST00000624354 TRAV8-7A0A075B6U6 113 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 TMEM212A6NML5 194 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 IGHV2-70P01814 119 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 HOXC4P09017 264 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 APEHP13798 732 aaKnown RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 RPA2P15927 270 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 LSSP48449 732 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 PGDP52209 483 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 AKR1C2P52895 323 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 AKR1C1Q04828 323 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 C2orf68Q2NKX9 166 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 C4orf46Q504U0 113 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 Q7L0L9 218 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 RNF44Q7L0R7 432 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 FAM122BQ7Z309 247 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 SKA3Q8IX90 412 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 ZNF595Q8IYB9 648 aa7.88□□□□□ -1.15
VCL-207ENST00000624354 MUC20Q8N307 709 aaPredicted RBP7.88□□□□□ -1.15
VCL-207ENST00000624354 OR51D1Q8NGF3 324 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms