RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ENTPD6O75354 484 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TRMUO75648 421 aaKnown RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 PIPP12273 146 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF12P17014 697 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 RAB3AP20336 220 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 SPOCK1Q08629 439 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 PLEKHN1Q494U1 663 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 USP51Q70EK9 711 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 LACC1Q8IV20 430 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 OR2M3Q8NG83 312 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 FAM46BQ96A09 425 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 RFT1Q96AA3 541 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 RAB1BQ9H0U4 201 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TXNIPQ9H3M7 391 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF552Q9H707 407 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 UBE2QL1A1L167 161 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 CDRT1O95170 752 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 PITPNBP48739 271 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 BDH1Q02338 343 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TSPYL5Q86VY4 417 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ARMC10Q8N2F6 343 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TBC1D15Q8TC07 691 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ASB17Q8WXJ9 295 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 PLK3Q9H4B4 646 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ANKRD19PQ9H560 264 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TAS2R16Q9NYV7 291 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 AASSQ9UDR5 926 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 MOKQ9UQ07 419 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 CLPXO76031 633 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SCGB2B2Q4G0G5 96 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TMEM205Q6UW68 189 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 NPSR1Q6W5P4 371 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-229ENST00000622668 MS4A15Q8N5U1 240 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SLC37A3Q8NCC5 494 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SLCO4A1Q96BD0 722 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 NIPAL2Q9H841 368 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ABRACLQ9P1F3 81 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF407Q9C0G0 2248 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 A6NIN4 97 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF432O94892 652 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 C1QAP02745 245 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SBK2P0C263 348 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SDHAP31040 664 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TSC22D1Q15714 1073 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TNFAIP8L3Q5GJ75 292 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 C9orf152Q5JTZ5 239 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
HDAC9-229ENST00000622668 FAM71CQ8NEG0 241 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 PSMA8Q8TAA3 256 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 UBASH3BQ8TF42 649 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 TAAR8Q969N4 342 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 C4orf36Q96KX1 117 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF681Q96N22 645 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 MGLLQ99685 303 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 OPN3Q9H1Y3 402 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-229ENST00000622668 SLC6A13Q9NSD5 602 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 DNAJB12Q9NXW2 375 aaKnown RBP8.16□□□□□ -1.1
HDAC9-229ENST00000622668 PTTG3PQ9NZH4 202 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 MIA3Q5JRA6 1907 aa8.16□□□□□ -1.1
HDAC9-229ENST00000622668 UMODP07911 640 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 TNFRSF1AP19438 455 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 ADH6P28332 368 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 ARHGDIBP52566 201 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 RTP5Q14D33 572 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 C6orf141Q5SZD1 244 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF454Q8N9F8 522 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 NDNFQ8TB73 568 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 PIGTQ969N2 578 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 SNRNP40Q96DI7 357 aaKnown RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 TECTBQ96PL2 329 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 MRPS26Q9BYN8 205 aaKnown RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 SIRT3Q9NTG7 399 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 B3GAT1Q9P2W7 334 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF850A8MQ14 1090 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 P2RY10O00398 339 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 HPRP00739 348 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 HIST1H1CP16403 213 aaKnown RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 SERPINA2P20848 420 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 IL2RGP31785 369 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 POLR2IP36954 125 aaKnown RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 WNT3P56703 355 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
HDAC9-229ENST00000622668 HES1Q14469 280 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 PSMF1Q92530 271 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 HPS1Q92902 700 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 ATF6BQ99941 703 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 NTMQ9P121 344 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 NOTCH3Q9UM47 2321 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 CADP27708 2225 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 TICRRQ7Z2Z1 1910 aa8.15□□□□□ -1.1
HDAC9-229ENST00000622668 A0A0J9YW62 118 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms