RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 MED18Q9BUE0 208 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 NARFLQ9H6Q4 476 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 MEMO1Q9Y316 297 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 NPFFR2Q9Y5X5 522 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 A0A1W2PR80 420 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CDC42EP2O14613 210 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ELK1P19419 428 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 BCKDHBP21953 392 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 EVX1P49640 407 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CAV2P51636 162 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 HCCSP53701 268 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 RAB11BQ15907 218 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 Q5BKY6 102 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 RAB12Q6IQ22 244 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 LANCL3Q6ZV70 420 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TMPRSS7Q7RTY8 843 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SFXN5Q8TD22 340 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 DEDD2Q8WXF8 326 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SNAPC3Q92966 411 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 UPRTQ96BW1 309 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PLPPR2Q96GM1 343 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 WWTR1Q9GZV5 400 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC6A20Q9NP91 592 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PRDM7Q9NQW5 492 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PCDHB16Q9NRJ7 776 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 MED29Q9NX70 200 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 COQ3Q9NZJ6 369 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ANKRD30BLA7E2S9 258 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CXCL13O43927 109 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TIMM8AO60220 97 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 DIRAS3O95661 229 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 UCHL1P09936 223 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TRAPPC2P0DI81 140 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TRAPPC2BP0DI82 140 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PVALBP20472 110 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TUBG1P23258 451 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SHC1P29353 583 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ERP29P30040 261 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 FGF9P31371 208 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC6A8P48029 635 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 GAS1P54826 345 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 KHDC1LQ5JSQ8 128 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 HBMQ6B0K9 141 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 RPL13AP3Q6NVV1 102 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CPNE2Q96FN4 548 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC35A4Q96G79 324 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CCDC74BQ96LY2 380 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 LRRC61Q9BV99 259 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SEMA4CQ9C0C4 833 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLA2Q9H6Q3 261 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SIDT1Q9NXL6 827 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM184BQ9Y519 407 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 TEX46H3BTG2 121 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PAHP00439 452 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ERGP11308 486 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ARSBP15848 533 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ART1P52961 327 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PRSS12P56730 875 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SSTP61278 116 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 AGERQ15109 404 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF620Q6ZNG0 422 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 WFDC8Q8IUA0 241 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 FAM71CQ8NEG0 241 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 OR5W2Q8NH69 310 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 OR14A16Q8NHC5 309 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 GPR148Q8TDV2 347 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PIGTQ969N2 578 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 UBQLN3Q9H347 655 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 NT5DC2Q9H857 520 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 GFOD1Q9NXC2 390 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 PTTG3PQ9NZH4 202 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 MBD2Q9UBB5 411 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 HS3ST3A1Q9Y663 406 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 DNAH14Q0VDD8 3507 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 DISC1C4P0D8 188 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 M0R036 132 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 LGALS8O00214 317 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ENSAO43768 121 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 FPR3P25089 353 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 TEAD1P28347 426 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PKLRP30613 574 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 HTR1FP30939 366 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 FABP6P51161 128 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 C17orf67Q0P5P2 114 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 AIMP2Q13155 320 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MAB21L1Q13394 359 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PRTGQ2VWP7 1150 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MFSD12Q6NUT3 480 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM99Q8N816 258 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF709Q8N972 641 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 OR7G2Q8NG99 324 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 OR4N2Q8NGD1 307 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PFN4Q8NHR9 129 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MNTQ99583 582 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms