RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RBMXP38159 391 aaKnown RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 LTBQ06643 244 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR7A5Q15622 319 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 SGCBQ16585 318 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 SGCAQ16586 387 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM52BQ4KMG9 183 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR10K2Q6IF99 312 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM64Q6YI46 380 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 STAC2Q6ZMT1 411 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR4K17Q8NGC6 315 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM106AQ96A25 262 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF681Q96N22 645 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 USB1Q9BQ65 265 aaKnown RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TIMM29Q9BSF4 260 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 SERINC1Q9NRX5 453 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ASF1BQ9NVP2 202 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF175Q9Y473 711 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 CEP250Q9BV73 2442 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TRAV8-7A0A075B6U6 113 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF208O43345 1280 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 CTNSO60931 367 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 RDH16O75452 317 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 RNH1P13489 461 aaKnown RBP6.34□□□□□ -1.4
NEDD9-216ENST00000620854 ADRA2CP18825 462 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 MST1P26927 711 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 S100A2P29034 98 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 PRSS3P35030 304 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 RGS19P49795 217 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 GPR143P51810 404 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 YPEL5P62699 121 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 MAT1AQ00266 395 aaKnown RBP6.34□□□□□ -1.4
NEDD9-216ENST00000620854 SERTAD2Q14140 314 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 MLC1Q15049 377 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 LIPNQ5VXI9 398 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 LCN10Q6JVE6 187 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 RPL13AP3Q6NVV1 102 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 RHOUQ7L0Q8 258 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 CRIPAKQ8N1N5 446 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 FAM71CQ8NEG0 241 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 MS4A4EQ96PG1 132 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 METTL7AQ9H8H3 244 aa6.34□□□□□ -1.4
NEDD9-216ENST00000620854 EXOSC3Q9NQT5 275 aaKnown RBP6.34□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF223Q9UK11 482 aaPredicted RBP6.34□□□□□ -1.4
NEDD9-216ENST00000620854 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR2M5A3KFT3 312 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TBX19O60806 448 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OPN1LWP04000 364 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PVALBP20472 110 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SNU13P55769 128 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 CSRP2Q16527 193 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 GUCA2BQ16661 112 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 C1orf189Q5VU69 101 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 KIAA0895LQ68EN5 471 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 RPL22L1Q6P5R6 122 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OVCH2Q7RTZ1 564 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM156Q8N614 296 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PLPP7Q8NBV4 271 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR5AK2Q8NH90 309 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 CMSS1Q9BQ75 279 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 RPP25Q9BUL9 199 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 MENTQ9BUN1 341 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 POFUT1Q9H488 388 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 FLRT3Q9NZU0 649 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SERTAD3Q9UJW9 196 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF281Q9Y2X9 895 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 A0A0A6YYC8 382 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM272A0A1B0GTI8 110 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 I3L1I5 382 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 DUX1O43812 170 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PRAMEF2O60811 474 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 RAB3DO95716 219 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 DCNP07585 359 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR2T7P0C7T2 308 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 MNX1P50219 401 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 DUSP3P51452 185 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PPP2CBP62714 309 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PPP2CAP67775 309 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 EEF1A1P68104 462 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 BAMBIQ13145 260 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ERV3-1Q14264 604 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 RBMS2Q15434 407 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 USF2Q15853 346 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 LYSMD4Q5XG99 296 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM205Q6UW68 189 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SHISA6Q6ZSJ9 500 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SLC35D2Q76EJ3 337 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 OR2T27Q8NH04 317 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 SFXN5Q8TD22 340 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PNPLA2Q96AD5 504 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 HIST1H2AAQ96QV6 131 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 PDE7BQ9NP56 450 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
NEDD9-216ENST00000620854 C14orf166Q9Y224 244 aaKnown RBP6.33□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM14AQ9Y6G1 99 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms