RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OR11A1Q9GZK7 315 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ASIC5Q9NY37 505 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 KIAA1456Q9P272 454 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 PAPPAQ13219 1627 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 FRG2CA6NGY1 282 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 PMP2P02689 132 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ALPLP05186 524 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 THBS3P49746 956 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ARL16Q0P5N6 197 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 EIF3IQ13347 325 aaKnown RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 HTR4Q13639 388 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ALKBH6Q3KRA9 238 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 CST9LP1Q5W188 147 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 COMMD7Q86VX2 200 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 HAS2Q92819 552 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 TCEAL2Q9H3H9 227 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 FAM96BQ9Y3D0 163 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 GOLGA4Q13439 2230 aaKnown RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 OR6C65A6NJZ3 312 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ABCD4O14678 606 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 TMPRSS11DO60235 418 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 RNF4P78317 190 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF766Q5HY98 468 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 DHRS4L2Q6PKH6 230 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 NKAIN3Q8N8D7 197 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 SHARPINQ9H0F6 387 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 SMOC1Q9H4F8 434 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 PLA2G3Q9NZ20 509 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ANXA7P20073 488 aaKnown RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 RAB6AP20340 208 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ARNTP27540 789 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 TRA2AQ13595 282 aaKnown RBP eCLIP10.4□□□□□ -0.743e-12■■■■□ 21.3
CLIP1-219ENST00000620786 NKAIN4Q8IVV8 208 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 C1orf87Q8N0U7 546 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 PLPP7Q8NBV4 271 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 OR52I1Q8NGK6 324 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 OXGR1Q96P68 337 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 NIPSNAP1Q9BPW8 284 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 RPP25Q9BUL9 199 aaKnown RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 SLC22A11Q9NSA0 550 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 TMEM30AQ9NV96 361 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 GLTPQ9NZD2 209 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 NID1P14543 1247 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 GLRA1P23415 457 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ADPRMQ3LIE5 342 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 THEM4Q5T1C6 240 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ROBO4Q8WZ75 1007 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ST8SIA1Q92185 356 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 GMPR2Q9P2T1 348 aaKnown RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 SLC22A23A1A5C7 686 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 F8W036 122 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 THBS1P07996 1170 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 SHC1P29353 583 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 RPL34P49207 117 aaKnown RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 BLOC1S1P78537 153 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 ATPAF1Q5TC12 328 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 RBM45Q8IUH3 476 aaKnown RBP10.4□□□□□ -0.74
CLIP1-219ENST00000620786 DEDD2Q8WXF8 326 aa10.4□□□□□ -0.74
CLIP1-219ENST00000620786 A0A087WZY1 265 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 RAB13P51153 203 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 TAS2R30P59541 319 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 PMPCAQ10713 525 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 OR51A2Q8NGJ7 313 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 RBMXL1Q96E39 390 aaKnown RBP10.4□□□□□ -0.75
CLIP1-219ENST00000620786 TMEM43Q9BTV4 400 aa10.4□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF346Q9UL40 294 aaKnown RBP10.4□□□□□ -0.75
CLIP1-219ENST00000620786 SH2D1BO14796 132 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 PHF1O43189 567 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 TSPAN12O95859 305 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 LGI1O95970 557 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR8U8P0C7N1 319 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 NME1P15531 152 aaKnown RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 TEAD1P28347 426 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 GLYATL3Q5SZD4 288 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OGFOD3Q6PK18 319 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 IDO2Q6ZQW0 420 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 DPPA2Q7Z7J5 298 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 KCNJ15Q99712 375 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 TMEM82A0PJX8 343 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 PIPP12273 146 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-219ENST00000620786 BCKDHBP21953 392 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OMGP23515 440 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 FAM53BQ14153 422 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 PLK5Q496M5 336 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 LYPD4Q6UWN0 246 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 TCTEX1D2Q8WW35 142 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 MRGPRX4Q96LA9 322 aa10.39□□□□□ -0.75
CLIP1-219ENST00000620786 UBQLN3Q9H347 655 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms