RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 C3P1Q6ZMU1 363 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 VASH1Q7L8A9 365 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GCNT2Q8N0V5 402 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 RPRMLQ8N4K4 120 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 OR52I1Q8NGK6 324 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 OR6K6Q8NGW6 343 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 OR6K3Q8NGY3 331 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 STARD4Q96DR4 205 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 TMEM80Q96HE8 168 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 COPS4Q9BT78 406 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 RBM24Q9BX46 236 aaKnown RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 ULBP2Q9BZM5 246 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 MARCH7Q9H992 704 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 CRLF2Q9HC73 371 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GPR35Q9HC97 309 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 CCNB1IP1Q9NPC3 277 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 SLC7A10Q9NS82 523 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 ERVK-18Q9QC07 812 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 UPB1Q9UBR1 384 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 TINAGQ9UJW2 476 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 UGT2A1Q9Y4X1 527 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 PCDHGB1Q9Y5G3 927 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MPDZO75970 2070 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 A0A087WXM4 84 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TRGV8A0A0C4DH27 118 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TVP23AA6NH52 213 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 HSPB2A8KAH6 182 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF593O00488 134 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 RGS10O43665 173 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MPZL1O95297 269 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CNOT4O95628 575 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 GPANK1O95872 356 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 IL18BPO95998 194 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CGAP01215 116 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 IGHV3-9P01782 118 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 HLA-DQA2P01906 255 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TFP02787 698 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 HRGP04196 525 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SCG5P05408 212 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CD8BP10966 210 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF823P16415 610 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 C21orf33P30042 268 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 OPRM1P35372 400 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF84P51523 738 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CDH15P55291 814 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SIRPAP78324 504 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MRPS34P82930 218 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ROR2Q01974 943 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 PIGFQ07326 219 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 HSPB2Q16082 182 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CEACAM16Q2WEN9 425 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TEX30Q5JUR7 227 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 RNLSQ5VYX0 342 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 VWA1Q6PCB0 445 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 LYPD4Q6UWN0 246 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TFAP2EQ6VUC0 442 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 FOXL2NBQ6ZUU3 175 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 AHSA2Q719I0 299 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 LINGO2Q7L985 606 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SLC16A9Q7RTY1 509 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 PRSS48Q7RTY5 328 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ABHD12BQ7Z5M8 362 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TIGD4Q8IY51 512 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 UBE2J2Q8N2K1 259 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CNEP1R1Q8N9A8 125 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 NAXEQ8NCW5 288 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SLC26A10Q8NG04 563 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 TSPAN14Q8NG11 270 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 OR4F15Q8NGB8 312 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 OR51G2Q8NGK0 314 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 C11orf40Q8WZ69 217 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SGCDQ92629 289 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF837Q96EG3 531 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 BBC3Q96PG8 261 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SIGLEC11Q96RL6 698 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MNTQ99583 582 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 RHNO1Q9BSD3 238 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SFXN3Q9BWM7 321 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 CDCA4Q9BXL8 241 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 YIPF3Q9GZM5 350 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 C12orf49Q9H741 205 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 WDR76Q9H967 626 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 SEC61A2Q9H9S3 476 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ADGRL4Q9HBW9 690 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 PAK1IP1Q9NWT1 392 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MRPL22Q9NWU5 206 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 PRSS50Q9UI38 385 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 PROCRQ9UNN8 238 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 DIMT1Q9UNQ2 313 aaKnown RBP7.07□□□□□ -1.28
CPNE3-209ENST00000620393 OSGIN2Q9Y236 505 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 MEMO1Q9Y316 297 aa7.07□□□□□ -1.28
CPNE3-209ENST00000620393 ATRXP46100 2492 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 A0A0G2JNJ9 132 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 TRIM64CA6NLI5 447 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms