RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SYT14P1Q58G82 188 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ENTPD8Q5MY95 495 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 C12orf73Q69YU5 71 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 HBMQ6B0K9 141 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 HIST2H2BCQ6DN03 193 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF770Q6IQ21 691 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 C1orf94Q6P1W5 598 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 VWA1Q6PCB0 445 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NHLRC1Q6VVB1 395 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 LINC00114Q6XXX2 140 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TMPRSS11AQ6ZMR5 421 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MEX3BQ6ZN04 569 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 DEF8Q6ZN54 512 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TMPPEQ6ZT21 453 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 RRM2BQ7LG56 351 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 P4HA3Q7Z4N8 544 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MEX3DQ86XN8 651 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NKAIN4Q8IVV8 208 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 WDFY1Q8IWB7 410 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 RNF113BQ8IZP6 322 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GCNT2Q8N0V5 402 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 PARP16Q8N5Y8 322 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 RELL2Q8NC24 303 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ANKK1Q8NFD2 765 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF563Q8TA94 476 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GRPEL2Q8TAA5 225 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NDNFQ8TB73 568 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GNPDA2Q8TDQ7 276 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ABHD3Q8WU67 409 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TAAR8Q969N4 342 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MBD6Q96DN6 1003 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 KTI12Q96EK9 354 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 SLC38A2Q96QD8 506 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 OR5B2Q96R09 309 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF426Q9BUY5 554 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FNDC11Q9BVV2 318 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TAPBPLQ9BX59 468 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TRIM2Q9C040 744 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FGF20Q9NP95 211 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NGBQ9NPG2 151 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 KLHL28Q9NXS3 571 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 VNN3Q9NY84 501 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MRPL39Q9NYK5 338 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 KLHL9Q9P2J3 617 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TESQ9UGI8 421 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 CLEC4AQ9UMR7 237 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 DIMT1Q9UNQ2 313 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 EXOSC1Q9Y3B2 195 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 C2CD3Q4AC94 2353 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NSD1Q96L73 2696 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TLN2Q9Y4G6 2542 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 A0A1W2PNV4 684 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TRAPPC13A5PLN9 417 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 NKX2-6A6NCS4 301 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 HMX3A6NHT5 357 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF716A6NP11 495 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CENPXA8MT69 81 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF724A8MTY0 619 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 C16orf97H3BN30 126 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CASKO14936 926 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PRODHO43272 600 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 OR2T1O43869 369 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PRKYO43930 277 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PIP5K1CO60331 668 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 OR10H3O60404 316 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ATP6V1G1O75348 118 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CTAG2O75638 210 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 OR5F1O95221 314 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PMS2P2O95744 297 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RAB36O95755 333 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PLGP00747 810 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CGAP01215 116 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 HLA-DPB1P04440 258 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 LCKP06239 509 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 YES1P07947 543 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ADORA3P0DMS8 318 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TFPIP10646 304 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CPEP16870 476 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PSMB1P20618 241 aaKnown RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 GADD45AP24522 165 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CXCR1P25024 350 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 COL8A1P27658 744 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 HLA-DMAP28067 261 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SDC2P34741 201 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 DDOSTP39656 456 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SLC9A3P48764 834 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CTBP2P56545 445 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 OR2B6P58173 313 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 NCS1P62166 190 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 EFNB1P98172 346 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CDK5Q00535 292 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TLE4Q04727 773 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PIGFQ07326 219 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ST3GAL3Q11203 375 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 FOXD4Q12950 439 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RIN1Q13671 783 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 MED22Q15528 200 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 EXOC3L2Q2M3D2 409 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms