RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GRHPRQ9UBQ7 328 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 FBXL3Q9UKT7 428 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 CUBNO60494 3623 aa13.83□□□□□ -0.19
BRCA1-228ENST00000618469 TEX13CA0A0J9YWL9 993 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 H7C417 338 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 NDUFB2O95178 105 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 CD14P08571 375 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 OR4A8P0C604 315 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 BMP4P12644 408 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 CDAP32320 146 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 NUDT6P53370 316 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 MRPS34P82930 218 aaKnown RBP13.83□□□□□ -0.2
BRCA1-228ENST00000618469 DAG1Q14118 895 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 ADIPOQQ15848 244 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 SLC36A2Q495M3 483 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 NRN1LQ496H8 165 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 TMEM53Q6P2H8 277 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 LRRC18Q8N456 261 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 IL17RDQ8NFM7 739 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 FANK1Q8TC84 345 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 CLPTM1LQ96KA5 538 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 Q96M85 177 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 RNF121Q9H920 327 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 IL20RAQ9UHF4 553 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 SIGLEC7Q9Y286 467 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 UGT2A1Q9Y4X1 527 aa13.83□□□□□ -0.2
BRCA1-228ENST00000618469 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.2
BRCA1-228ENST00000618469 A0A1W2PPL8 197 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 UNC119BA6NIH7 251 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 XKRYO14609 159 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 OR10H3O60404 316 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 UBOX5O94941 541 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 THBS4P35443 961 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 SERPINF1P36955 418 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 GALK2Q01415 458 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 KRR1Q13601 381 aaKnown RBP13.82□□□□□ -0.2
BRCA1-228ENST00000618469 TRIM25Q14258 630 aaKnown RBP13.82□□□□□ -0.2
BRCA1-228ENST00000618469 MESTQ5EB52 335 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 SLC25A47Q6Q0C1 308 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 THSD4Q6ZMP0 1018 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 DPPA2Q7Z7J5 298 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 ZNF584Q8IVC4 421 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 ARIH2OSQ8N7S6 290 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 FNDC8Q8TC99 324 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 NABP1Q96AH0 204 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 RASD2Q96D21 266 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 RBP7Q96R05 134 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 GPX7Q96SL4 187 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-228ENST00000618469 GPA33Q99795 319 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 C1orf21Q9H246 121 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 ZNF442Q9H7R0 627 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 TAS2R1Q9NYW7 299 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 TMCC3Q9ULS5 477 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 MXRA5Q9NR99 2828 aa13.82□□□□□ -0.2
BRCA1-228ENST00000618469 NBEAL1Q6ZS30 2694 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SSX4O60224 188 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 GPRIN2O60269 458 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SERPINA5P05154 406 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 NPR2P20594 1047 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 FXYD6P3P58550 94 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 KRTAP1-1Q07627 177 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 TNK1Q13470 666 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 RAB35Q15286 201 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SGCAQ16586 387 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 THEM4Q5T1C6 240 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SLC30A7Q8NEW0 376 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 ASB9Q96DX5 294 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 LRGUKQ96M69 825 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 THTPAQ9BU02 230 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 SIAEQ9HAT2 523 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 CCNB1IP1Q9NPC3 277 aa13.81□□□□□ -0.2
BRCA1-228ENST00000618469 B9A039 149 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SOCS2O14508 198 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 PTP4A3O75365 173 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 STAMBPO95630 424 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 ZNF35P13682 527 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 NR4A1P22736 598 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 FPR3P25089 353 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SDHAP31040 664 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 IFNGR2P38484 337 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 MAGEA2P43356 314 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 MS4A2Q01362 244 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 HSF2Q03933 536 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 EFNB3Q15768 340 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 MST1LQ2TV78 715 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SVOPLQ8N434 492 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 PLK3Q9H4B4 646 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 MAGIXQ9H6Y5 334 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 NRIP3Q9NQ35 241 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SLC7A8Q9UHI5 535 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 SPEF1Q9Y4P9 236 aa13.8□□□□□ -0.2
BRCA1-228ENST00000618469 LYVE1Q9Y5Y7 322 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms