RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 GBA2Q9HCG7 927 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 HAND1O96004 215 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 KNG1P01042 644 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TYRP1P17643 537 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SYT14P1Q58G82 188 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CMTM1Q8IZ96 169 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PUSL1Q8N0Z8 303 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PSMG2Q969U7 264 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35G5Q96KT7 338 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CHST11Q9NPF2 352 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TBX21Q9UL17 535 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 DNASE2O00115 360 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TLX3O43711 291 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ENDOD1O94919 500 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR2T7P0C7T2 308 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PTHLHP12272 177 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CTSSP25774 331 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 AGTR2P50052 363 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF92Q03936 586 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 LTBQ06643 244 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ARSIQ5FYB1 569 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR14L1PQ8NHC6 308 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 UHRF2Q96PU4 802 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 KIAA1549LQ6ZVL6 1849 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NME2P1O60361 137 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ERVPABLB-1P60509 514 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35A1P78382 337 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 AWAT1Q58HT5 328 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SHDQ96IW2 340 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 UTP23Q9BRU9 249 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SMPD1P17405 629 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CD200P41217 278 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 MC1RQ01726 317 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ELOBQ15370 118 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 AGBL4Q5VU57 503 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ABI3BPQ7Z7G0 1075 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 LYG2Q86SG7 212 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 GLCCI1Q86VQ1 547 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZSCAN4Q8NAM6 433 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PPP1R1CQ8WVI7 109 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NSUN5Q96P11 429 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ENY2Q9NPA8 101 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SLC17A5Q9NRA2 495 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PLEK2Q9NYT0 353 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PMP2P02689 132 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 HOXB5P09067 269 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 HOXA5P20719 270 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PIM3Q86V86 326 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 MARCH5Q9NX47 278 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SCN2AQ99250 2005 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM212A6NML5 194 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF727A8MUV8 499 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 APBB3O95704 486 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 HSD11B1P28845 292 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CCR8P51685 355 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 DGKEP52429 567 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 STC1P52823 247 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CAMKMTQ7Z624 323 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 EGLN2Q96KS0 407 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR5B2Q96R09 309 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CHRDL1Q9BU40 450 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PARP11Q9NR21 331 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NDOR1Q9UHB4 597 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 RBFOX3A6NFN3 312 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TCN2P20062 427 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 KIAA0319Q5VV43 1072 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR8G2PQ6IF36 304 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 LMLNQ96KR4 655 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ORAI3Q9BRQ5 295 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SLC26A1Q9H2B4 701 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 A6NCN8 305 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR2J2O76002 312 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 RPL13AP40429 203 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 FASLGP48023 281 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ELOCQ15369 112 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF626Q68DY1 528 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 LAMTOR1Q6IAA8 161 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ERN2Q76MJ5 926 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 MYPOPQ86VE0 399 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 WIPI2Q9Y4P8 454 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TRAPPC2LH3BP13 241 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 GFRA2O00451 464 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SLC25A17O43808 307 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 HLA-DOBP13765 273 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 FAM3BP58499 235 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 GAMTQ14353 236 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 IAH1Q2TAA2 248 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM201Q5SNT2 666 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 Q6ZRG5 221 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 GPR150Q8NGU9 434 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 EMID1Q96A84 441 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR2J1Q9GZK6 312 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR10A5Q9H207 317 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 DEDDO75618 318 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 EIF4EP06730 217 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 MMP2P08253 660 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SPTBP11277 2137 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CRKLP46109 303 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF140P52738 457 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms