RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TRBV11-1A0A0K0K1C0 115 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 TMEM200CA6NKL6 621 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 MS4A18H0YCH9 400 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 GPR171O14626 319 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 GSTZ1O43708 216 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 TRIM3O75382 744 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZNF254O75437 659 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 AHSA1O95433 338 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ALDOBP05062 364 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 KLK2P20151 261 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 UBE2MP61081 183 aaKnown RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 FOXF1Q12946 379 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 MS4A18Q3C1V0 323 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR10K2Q6IF99 312 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 BTN2A1Q7KYR7 527 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ANKRD37Q7Z713 158 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 KRT77Q7Z794 578 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR52B4Q8NGK2 314 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLITRK2Q9H156 845 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 TXNIPQ9H3M7 391 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZMAT3Q9HA38 289 aaKnown RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZDBF2Q9HCK1 2354 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 MRPS17Q9Y2R5 130 aaKnown RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ADAMTS9Q9P2N4 1935 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 TRBV5-7A0A0A0MS05 114 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 A0A1W2PQD3 144 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 MASP2O00187 686 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 EFNA2O43921 213 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 IGF2P01344 180 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 HEXBP07686 556 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 CCL7P80098 99 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 BPHLQ86WA6 291 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF431Q8TF32 576 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 DNASE2BQ8WZ79 361 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 DVL3Q92997 716 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 HAVCR1Q96D42 359 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 EMC9Q9Y3B6 208 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 GABARAPH6UMI1 98 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 CSRP1P21291 193 aaKnown RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 POU3F4P49335 361 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 PAPD4Q6PIY7 484 aaKnown RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 LIX1LQ8IVB5 337 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 MIB2Q96AX9 1013 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF768Q9H5H4 540 aaKnown RBP12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 PRDM6Q9NQX0 595 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 TAS2R4Q9NYW5 299 aa12.64□□□□□ -0.39
PCDHGA3-202ENST00000612467 FTCDNL1E5RQL4 147 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 SCRG1O75711 98 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 CELA2AP08217 269 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 STARD6P59095 220 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 EGR3Q06889 387 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 OR8S1Q8NH09 359 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 CYYR1Q96J86 154 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 METTL17Q9H7H0 456 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 CA10Q9NS85 328 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 DCDC2BA2VCK2 349 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 TMEM212A6NML5 194 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 CTDSPLO15194 276 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 ANOS1P23352 680 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 CXCL12P48061 93 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 ARPC4P59998 168 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 DMRTC1Q5HYR2 192 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 Q7L0L9 218 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF679Q8IYX0 411 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 NXPE2Q96DL1 559 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 C12orf10Q9HB07 376 aa12.63□□□□□ -0.39
PCDHGA3-202ENST00000612467 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 LY6G6EA0A0G2JKS1 128 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 ANXA3P12429 323 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 PSMB1P20618 241 aaKnown RBP12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 OC90Q02509 493 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 SPOCK1Q08629 439 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 RHBDD2Q6NTF9 364 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 PRSS42Q7Z5A4 293 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 PLCZ1Q86YW0 608 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 OR10G3Q8NGC4 313 aa12.62□□□□□ -0.39
PCDHGA3-202ENST00000612467 OR8H1Q8NGG4 311 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms