RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
TCF3-220ENST00000611869 DLX5P56178 289 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 GABREP78334 506 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 CD226Q15762 336 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 ESX1Q8N693 406 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 IL17RDQ8NFM7 739 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 TAAR8Q969N4 342 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 C10orf90Q96M02 699 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 MOGAT1Q96PD6 335 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 DCLRE1CQ96SD1 692 aaKnown RBP11.94□□□□□ -0.5
TCF3-220ENST00000611869 OR10A2Q9H208 303 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
TCF3-220ENST00000611869 IFITM5A6NNB3 132 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 MSX1P28360 303 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 CRYBA2P53672 197 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 MALLQ13021 153 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SF3B4Q15427 424 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 17.9
TCF3-220ENST00000611869 ZNF770Q6IQ21 691 aaPredicted RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 LINC00696Q6ZRV3 163 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 LOC107986453A0A1B0GWG9 222 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FITM1A5D6W6 292 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SSX4O60224 188 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 GPANK1O95872 356 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 TP53P04637 393 aaPredicted RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 APEHP13798 732 aaKnown RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 FAM199XQ6PEV8 388 aaPredicted RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 AAED1Q7RTV5 226 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 CMTM4Q8IZR5 234 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 OR2G2Q8NGZ5 317 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 HSD17B8Q92506 261 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FSCN3Q9NQT6 498 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SLCO1C1Q9NYB5 712 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 NPAP1Q9NZP6 1156 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ASH2LQ9UBL3 628 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ZNF646O15015 1829 aaPredicted RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 SCGNO76038 276 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ZNF16P17020 682 aaPredicted RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 TBXA2RP21731 343 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 VAMP2P63027 116 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FOXF1Q12946 379 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 IDO2Q6ZQW0 420 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 CLEC1AQ8NC01 280 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SNX18Q96RF0 628 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ADGRL4Q9HBW9 690 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 TAS2R4Q9NYW5 299 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ACAD8Q9UKU7 415 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 M0QYG6 137 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SPDEFO95238 335 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 EPXP11678 715 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ICAM2P13598 275 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 CDK2P24941 298 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 CCR9P51686 369 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ZNF136P52737 540 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FXYD4P59646 89 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FAAP20Q6NZ36 180 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 FAM198BQ6UWH4 519 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 DGAT2L6Q6ZPD8 337 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 TMPPEQ6ZT21 453 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ZNF679Q8IYX0 411 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 ZNF321PQ8N8H1 164 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 OR5H6Q8NGV6 325 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
TCF3-220ENST00000611869 WNT16Q9UBV4 365 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 B9D1Q9UPM9 204 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 SPEF1Q9Y4P9 236 aa11.93□□□□□ -0.5
TCF3-220ENST00000611869 YKT6O15498 198 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 PTBP1P26599 531 aaKnown RBP eCLIP11.92□□□□□ -0.5
TCF3-220ENST00000611869 KIR2DL3P43628 341 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 IL13RA1P78552 427 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 RBMS2Q15434 407 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 SLC36A2Q495M3 483 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 PTP4A1Q93096 173 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 SVILO95425 2214 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 AIPO00170 330 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 ARPC3O15145 178 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 FOXS1O43638 330 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 IRF3Q14653 427 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 ZNF141Q15928 474 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 EIF5AL1Q6IS14 154 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 TRAPPC6BQ86SZ2 158 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 YRDCQ86U90 279 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 MIB2Q96AX9 1013 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 CDC6Q99741 560 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 ETV7Q9Y603 341 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 TPRP12270 2363 aaKnown RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 EP300Q09472 2414 aaPredicted RBP11.92□□□□□ -0.5
TCF3-220ENST00000611869 CEP250Q9BV73 2442 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 A6NCN8 305 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 UQCRC1P31930 480 aa11.92□□□□□ -0.5
TCF3-220ENST00000611869 HTR5AP47898 357 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms