RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 CLCC1Q96S66 551 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 PBX4Q9BYU1 374 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 MOKQ9UQ07 419 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 TDRD6O60522 2096 aaKnown RBP12.64□□□□□ -0.39
MUC1-223ENST00000611571 C1orf196B1AJZ1 125 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 AIPO00170 330 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
MUC1-223ENST00000611571 CAPZA1P52907 286 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 ACY1Q03154 408 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 PMPCAQ10713 525 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
MUC1-223ENST00000611571 ATOH1Q92858 354 aaPredicted RBP12.64□□□□□ -0.39
MUC1-223ENST00000611571 BIN3Q9NQY0 253 aa12.64□□□□□ -0.39
MUC1-223ENST00000611571 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 hCG_1807616A0A1W2PRN6 198 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 OR5K3A6NET4 321 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 PRAMEF25A6NGN4 478 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 GMDSO60547 372 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 ZNF93P35789 620 aaPredicted RBP12.63□□□□□ -0.39
MUC1-223ENST00000611571 EEF1A2Q05639 463 aaKnown RBP12.63□□□□□ -0.39
MUC1-223ENST00000611571 PRSS53Q2L4Q9 553 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 NHLRC1Q6VVB1 395 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 HSD17B11Q8NBQ5 300 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 PXT1Q8NFP0 134 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 LINC00615Q96LM1 132 aaPredicted RBP12.63□□□□□ -0.39
MUC1-223ENST00000611571 C20orf24Q9BUV8 137 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 ENKD1Q9H0I2 346 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 KCNK15Q9H427 330 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 LDAHQ9H6V9 325 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 OR1D5P58170 312 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 MEF2DQ14814 521 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SFTPA2Q8IWL1 248 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 OR4C16Q8NGL9 310 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SLC2A12Q8TD20 617 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SORCS2Q96PQ0 1159 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 A6NLC8 198 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 DPM1O60762 260 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 NXPH3O95157 252 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 FCGR2AP12318 317 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 TSFMP43897 325 aaKnown RBP12.63□□□□□ -0.39
MUC1-223ENST00000611571 PER3P56645 1201 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SUMF1Q8NBK3 374 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 TCTN2Q96GX1 697 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 MRGPRX1Q96LB2 322 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SEMA6CQ9H3T2 930 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 SLCO1C1Q9NYB5 712 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 OR52A1Q9UKL2 312 aa12.63□□□□□ -0.39
MUC1-223ENST00000611571 MRPS28Q9Y2Q9 187 aaKnown RBP12.63□□□□□ -0.39
MUC1-223ENST00000611571 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 OR6C68A6NDL8 312 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
MUC1-223ENST00000611571 RPA2P15927 270 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 HOXC12P31275 282 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 IRF3Q14653 427 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 C1orf140Q5VVS0 124 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 OVCH1Q7RTY7 1134 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 UBE3DQ7Z6J8 389 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 ADAMTS18Q8TE60 1221 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 PIGCQ92535 297 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 RADILQ96JH8 1075 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 STACQ99469 402 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 KCNJ16Q9NPI9 418 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 A6NIZ1 184 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 RAP1BP61224 184 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 RAP1AP62834 184 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
MUC1-223ENST00000611571 ZNF628Q5EBL2 1059 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 ZAR1Q86SH2 424 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 GLYATL2Q8WU03 294 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 MIB2Q96AX9 1013 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 BMFQ96LC9 184 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 NARFLQ9H6Q4 476 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 KLHL13Q9P2N7 655 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.62□□□□□ -0.39
MUC1-223ENST00000611571 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.62□□□□□ -0.39
MUC1-223ENST00000611571 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 CT62P0C5K7 136 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 P2RX1P51575 399 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 CLDN17P56750 224 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 CLVS2Q5SYC1 327 aa12.62□□□□□ -0.39
MUC1-223ENST00000611571 PAPD4Q6PIY7 484 aaKnown RBP12.62□□□□□ -0.39
MUC1-223ENST00000611571 GLIPR1L1Q6UWM5 242 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms