RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 ADPRMQ3LIE5 342 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 CCSMST1Q4G0I0 132 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 SYT14P1Q58G82 188 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 ENTPD8Q5MY95 495 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 TCHHL1Q5QJ38 904 aaPredicted RBP3.63□□□□□ -1.83
LINC00540-201ENST00000611481 SAXO2Q658L1 398 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 C11orf63Q6NUN7 778 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 VN1R4Q7Z5H5 301 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 LRRC49Q8IUZ0 686 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 FAM71AQ8IYT1 594 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 RAB42Q8N4Z0 105 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 ZNF321PQ8N8H1 164 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 TEX45Q8NA69 505 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 LINC00301Q8NCQ3 95 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 OR8J1Q8NGP2 316 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 OR5M8Q8NGP6 311 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 RDH11Q8TC12 318 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 HSD17B8Q92506 261 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 TMEM18Q96B42 140 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 MTBPQ96DY7 904 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 MTERF3Q96E29 417 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 FBXO17Q96EF6 278 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 TSSK2Q96PF2 358 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 NODALQ96S42 347 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 GON7Q9BXV9 100 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 FAM192AQ9GZU8 254 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 RHBGQ9H310 441 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 METTL7AQ9H8H3 244 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 Q9N2K0 584 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 SLC52A3Q9NQ40 469 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 COPS7AQ9UBW8 275 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINC00540-201ENST00000611481 CHCHD2Q9Y6H1 151 aaPredicted RBP3.63□□□□□ -1.83
LINC00540-201ENST00000611481 PRSS21Q9Y6M0 314 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
LINC00540-201ENST00000611481 HECTD4Q9Y4D8 3996 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PRSS51A0A1B0GVH4 220 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OR2M5A3KFT3 312 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 F8VVB4 439 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 F8VWA3 439 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 MS4A18H0YCH9 400 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 KCNK1O00180 336 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PSMD12O00232 456 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 CHEK1O14757 476 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 WNT9BO14905 357 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 BUB3O43684 328 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 E2F6O75461 281 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 WBP4O75554 376 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OR4F21O95013 312 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 ZNF708P17019 499 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 NCF2P19878 526 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PSMA2P25787 234 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 MIPP30301 263 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 TNFSF8P32971 234 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 RPA3P35244 121 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 GLIPR1P48060 266 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SLC1A6P48664 564 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 NR2C2P49116 596 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 LHX2P50458 406 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SUCLG1P53597 346 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 CLDN18P56856 261 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 MYBPC1Q00872 1141 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SLC3A1Q07837 685 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PPIDQ08752 370 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 ZBTB17Q13105 803 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 RBM39Q14498 530 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SSX2Q16385 188 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 STX1AQ16623 288 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 FBXO48Q5FWF7 155 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PIGGQ5H8A4 983 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SIRPB2Q5JXA9 342 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 C18orf63Q68DL7 685 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 ZNF770Q6IQ21 691 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 ZNF544Q6NX49 715 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 DNAJC24Q6P3W2 148 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 TTC23LQ6PF05 361 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 DCUN1D2Q6PH85 259 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 KCTD18Q6PI47 426 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 CYP4V2Q6ZWL3 525 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 GPR141Q7Z602 305 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PATL1Q86TB9 770 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 UBQLNLQ8IYU4 475 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 THAP8Q8NA92 274 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OR4K2Q8NGD2 314 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OR5L2Q8NGL0 311 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 SPATA22Q8NHS9 363 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 GIPC3Q8TF64 312 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PINX1Q96BK5 328 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 IMP4Q96G21 291 aaKnown RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OXNAD1Q96HP4 312 aaPredicted RBP3.62□□□□□ -1.83
LINC00540-201ENST00000611481 C4orf36Q96KX1 117 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 RILPQ96NA2 401 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 OR8D2Q9GZM6 311 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 RNF122Q9H9V4 155 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 FOLH1BQ9HBA9 442 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 RAB9BQ9NP90 201 aa3.62□□□□□ -1.83
LINC00540-201ENST00000611481 ACOXLQ9NUZ1 547 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms