RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OR11A1Q9GZK7 315 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 SHARPINQ9H0F6 387 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 C12orf10Q9HB07 376 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 SOHLH2Q9NX45 425 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 OR4E1P0C645 316 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 AKAIN1P0CW23 69 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 AKR1C4P17516 323 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 NTSR1P30989 418 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 TPMTP51580 245 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 NR0B2Q15466 257 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 ZNF74Q16587 644 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 FAM160A2Q8N612 972 aaPredicted RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 MARVELD3Q96A59 401 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 INTS14Q96SY0 518 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 PLEKHA1Q9HB21 404 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 APMAPQ9HDC9 416 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM82A0PJX8 343 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 XKRYO14609 159 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 OR2A4O95047 310 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 HLA-AP01891 365 aaKnown RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 RBM34P42696 430 aaKnown RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 KIR2DL1P43626 348 aaPredicted RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 EIF2B1Q14232 305 aaKnown RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 FAM122CQ6P4D5 195 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 THAP3Q8WTV1 239 aaPredicted RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 OR2A7Q96R45 310 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 SLC38A3Q99624 504 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 DMDP11532 3685 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 CTSEP14091 401 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 CPN1P15169 458 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 MST1P26927 711 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 CAPZA1P52907 286 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 HHEXQ03014 270 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 RAB11BQ15907 218 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 CDNFQ49AH0 187 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 C16orf47Q6ZP98 133 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-216ENST00000610401 KRT77Q7Z794 578 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 MAP3K3Q99759 626 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 NXF5Q9H1B4 397 aaKnown RBP18.45■□□□□ 0.54
SSBP3-216ENST00000610401 D6RAR5 112 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 AK1P00568 194 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 PRPS1P60891 318 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 ADAM8P78325 824 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 MC2RQ01718 297 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 GABRG1Q8N1C3 465 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-216ENST00000610401 METTL21AQ8WXB1 218 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 MRPS24Q96EL2 167 aaKnown RBP18.45■□□□□ 0.54
SSBP3-216ENST00000610401 CPNE2Q96FN4 548 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-216ENST00000610401 SLC6A7Q99884 636 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 MMP25Q9NPA2 562 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 FRYQ5TBA9 3013 aa18.45■□□□□ 0.54
SSBP3-216ENST00000610401 LOC101059948A0A1B0GTJ6 334 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 PRR19A6NJB7 356 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 DCNP07585 359 aaKnown RBP18.44■□□□□ 0.54
SSBP3-216ENST00000610401 NAGAP17050 411 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 GGTLC2Q14390 218 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 OLFML2AQ68BL7 652 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 CDH26Q8IXH8 852 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 SDR16C5Q8N3Y7 309 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 C12orf45Q8N5I9 185 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-216ENST00000610401 ASF1BQ9NVP2 202 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 WDFY4Q6ZS81 3184 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 A0A1W2PQF6 199 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 C17orf105B2RV13 164 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 H0YIG0 161 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 CALCBP10092 127 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 GLULP15104 373 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 SDHAP31040 664 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 GNALP38405 381 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 RAB38P57729 211 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 MCATQ8IVS2 390 aaKnown RBP18.44■□□□□ 0.54
SSBP3-216ENST00000610401 OR1J4Q8NGS1 313 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 NMNAT2Q9BZQ4 307 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 IFT46Q9NQC8 304 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 EMC9Q9Y3B6 208 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 FANCMQ8IYD8 2048 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 SCDO00767 359 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 PI3P19957 117 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 MAPK3P27361 379 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-216ENST00000610401 ATP1B3P54709 279 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 ZNF169Q14929 603 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-216ENST00000610401 FOXRED2Q8IWF2 684 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 PXT1Q8NFP0 134 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 BPIFCQ8NFQ6 507 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 FBXL21Q9UKT6 434 aa18.44■□□□□ 0.54
SSBP3-216ENST00000610401 A0A0J9YY10 115 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 GPR31O00270 319 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 RENP00797 406 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 PSMD4P55036 377 aaKnown RBP18.43■□□□□ 0.54
SSBP3-216ENST00000610401 LINC00114Q6XXX2 140 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 BPIFB2Q8N4F0 458 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 NUDCD2Q8WVJ2 157 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 RLN3Q8WXF3 142 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 SLC25A44Q96H78 314 aaPredicted RBP18.43■□□□□ 0.54
SSBP3-216ENST00000610401 VRK1Q99986 396 aaPredicted RBP18.43■□□□□ 0.54
SSBP3-216ENST00000610401 DHDHQ9UQ10 334 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 MRPS18BQ9Y676 258 aaKnown RBP18.43■□□□□ 0.54
SSBP3-216ENST00000610401 OR5H14A6NHG9 310 aa18.43■□□□□ 0.54
SSBP3-216ENST00000610401 F5H0A9 414 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms