RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TSTA3Q13630 321 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF697Q5TEC3 545 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ARMC6Q6NXE6 501 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 BTNL8Q6UX41 500 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 COMMD6Q7Z4G1 85 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 LINC00471Q8N535 108 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ZSCAN4Q8NAM6 433 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF461Q8TAF7 563 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ADAMTS17Q8TE56 1095 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 C1orf198Q9H425 327 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 MED17Q9NVC6 651 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 C5AR2Q9P296 337 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 FARSAQ9Y285 508 aaKnown RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 MRPS23Q9Y3D9 190 aaKnown RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 V9GY05 133 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 PRAMEF27A3QJZ7 478 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 B4E171 279 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 H3BSH0 61 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 RPL36A-HNRNPH2H7BZ11 118 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ITGB2P05107 769 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 RAB40ALP0C0E4 278 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 NR2F1P10589 423 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 S100A7P31151 101 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 IFNGR2P38484 337 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 DCAF10Q5QP82 559 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 NCR3LG1Q68D85 454 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 GKN2Q86XP6 184 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 GID4Q8IVV7 300 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 NRMQ8IXM6 262 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ARL14Q8N4G2 192 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 TRAM1L1Q8N609 369 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 CYB561A3Q8NBI2 242 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 RAB40AQ8WXH6 277 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 C22orf15Q8WYQ4 148 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 SMPDL3AQ92484 453 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 DIRC2Q96SL1 478 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 SLC2A4RGQ9NR83 387 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 PRG3Q9Y2Y8 225 aaPredicted RBP11.43□□□□□ -0.58
CTCFL-218ENST00000608440 HS3ST3B1Q9Y662 390 aa11.43□□□□□ -0.58
CTCFL-218ENST00000608440 ARID1AO14497 2285 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 A0A087WV62 115 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 A0A1B0GV50 99 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 MAN2B1O00754 1011 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CYB5BO43169 146 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CTNSO60931 367 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 IGSF6O95976 241 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 AMY2AP04746 511 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 KLK1P06870 262 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 EDNRAP25101 427 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CARD18P57730 90 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 NAAAQ02083 359 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 C9orf64Q5T6V5 341 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF620Q6ZNG0 422 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 DEFB128Q7Z7B8 93 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 C16orf78Q8WTQ4 265 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 KISS1RQ969F8 398 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 PARD6GQ9BYG4 376 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 A4GALTQ9NPC4 353 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 SPHK2Q9NRA0 654 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 UPB1Q9UBR1 384 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 FLVCR1Q9Y5Y0 555 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 KIAA0100Q14667 2235 aaKnown RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 TET1Q8NFU7 2136 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 TRAV18A0A075B6X5 111 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CDC42EP2O14613 210 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 TGOLN2O43493 480 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CRYABP02511 175 aaKnown RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CTSLP07711 333 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 PSMB6P28072 239 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 GAGE1Q13065 139 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 ENPP2Q13822 863 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 RHEBQ15382 184 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 PSRC1Q6PGN9 363 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CD300LGQ6UXG3 332 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 BHLHE23Q8NDY6 225 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 Q8WTZ3 238 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 SUSD6Q92537 303 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 ZNF426Q9BUY5 554 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 PDFQ9HBH1 243 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CSNK1G1Q9HCP0 422 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
CTCFL-218ENST00000608440 B4GALT2O60909 372 aa11.41□□□□□ -0.58
CTCFL-218ENST00000608440 EOMESO95936 686 aa11.41□□□□□ -0.58
CTCFL-218ENST00000608440 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
CTCFL-218ENST00000608440 S1PR1P21453 382 aa11.41□□□□□ -0.58
CTCFL-218ENST00000608440 HTR2CP28335 458 aa11.41□□□□□ -0.58
CTCFL-218ENST00000608440 GPR3P46089 330 aa11.41□□□□□ -0.58
CTCFL-218ENST00000608440 MANFP55145 182 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms