RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 SIAEQ9HAT2 523 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 SLCO1B3Q9NPD5 702 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 TAS2R5Q9NYW4 299 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 ZNF229Q9UJW7 825 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
HDDC2-203ENST00000608284 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 TGP01266 2768 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 CENPBD1B2RD01 187 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 UBOX5O94941 541 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 IGHMP01871 453 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
HDDC2-203ENST00000608284 PGA4P0DJD7 388 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 PGA3P0DJD8 388 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 NR2C1P13056 603 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 AQP1P29972 269 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 ZNF154Q13106 437 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 PABPC1L2AQ5JQF8 200 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 SPATA46Q5T0L3 261 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 NANOGNBQ7Z5D8 188 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 GTF3AQ92664 365 aaKnown RBP13.39□□□□□ -0.27
HDDC2-203ENST00000608284 MAELQ96JY0 434 aaKnown RBP13.39□□□□□ -0.27
HDDC2-203ENST00000608284 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 ELOVL3Q9HB03 270 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-203ENST00000608284 EGFL7Q9UHF1 273 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 LEF1Q9UJU2 399 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-203ENST00000608284 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
HDDC2-203ENST00000608284 A0A0G2JK05 382 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 H3BSA7 217 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 CLDN34H7C241 214 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 SNNO75324 88 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 TNFRSF1AP19438 455 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 TNFAIP6P98066 277 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 MPP2Q14168 576 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 SGCAQ16586 387 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 MBNL2Q5VZF2 373 aaKnown RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 COMTD1Q86VU5 262 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 SLC25A40Q8TBP6 338 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 KLF14Q8TD94 323 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-203ENST00000608284 MPP4Q96JB8 637 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 C1QTNF5Q9BXJ0 243 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 OR5V1Q9UGF6 321 aa13.38□□□□□ -0.27
HDDC2-203ENST00000608284 CPSF4LA6NMK7 179 aaKnown RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 KPNA4O00629 521 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 SURF4O15260 269 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 TIMM8AO60220 97 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 CRYBA1P05813 215 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 MMP15P51511 669 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 PPP1CBP62140 327 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 NPTX1Q15818 432 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 ESCO2Q56NI9 601 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 ENTPD8Q5MY95 495 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 LRIF1Q5T3J3 769 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 BTNL3Q6UXE8 466 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 C17orf107Q6ZR85 190 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 SMYD1Q8NB12 490 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 DEFB108BQ8NET1 73 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 OR52E2Q8NGJ4 325 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 MARS2Q96GW9 593 aaKnown RBP13.37□□□□□ -0.27
HDDC2-203ENST00000608284 OR52B2Q96RD2 323 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 ZNF347Q96SE7 839 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 OR2J1Q9GZK6 312 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 MMP26Q9NRE1 261 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 NKIRAS1Q9NYS0 192 aa13.37□□□□□ -0.27
HDDC2-203ENST00000608284 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 TRAPPC13A5PLN9 417 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 M0R3H8 397 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 TPST2O60704 377 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 ADH4P08319 380 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
HDDC2-203ENST00000608284 ACADSP16219 412 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 ZNF12P17014 697 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 PCGF2P35227 344 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 MPV17P39210 176 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 PCBD1P61457 104 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
HDDC2-203ENST00000608284 TAF11Q15544 211 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 TMEM155Q4W5P6 130 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 C16orf87Q6PH81 154 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 MREGQ8N565 214 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 C11orf65Q8NCR3 313 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 NOXO1Q8NFA2 376 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 SLC26A7Q8TE54 656 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 GEMIN6Q8WXD5 167 aaKnown RBP13.36□□□□□ -0.27
HDDC2-203ENST00000608284 SPDL1Q96EA4 605 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
HDDC2-203ENST00000608284 PATZ1Q9HBE1 687 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms