RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CD40P25942 277 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 CDAP32320 146 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 GRK5P34947 590 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 GIPRP48546 466 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 DAPP51397 102 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 ESRRGP62508 458 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RAB1AP62820 205 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 TUBA1BP68363 451 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 TUBA4AP68366 448 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 BSPH1Q075Z2 132 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 PGGHGQ32M88 737 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 FOXL2NBQ6ZUU3 175 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 IL17RDQ8NFM7 739 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 OR4Q3Q8NH05 313 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 SLC38A2Q96QD8 506 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 SH3GL3Q99963 347 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RBM4BQ9BQ04 359 aaKnown RBP12.44□□□□□ -0.42
CTSA-219ENST00000607841 KCNS3Q9BQ31 491 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 TMEM204Q9BSN7 226 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 WACQ9BTA9 647 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RBM4Q9BWF3 364 aaKnown RBP12.44□□□□□ -0.42
CTSA-219ENST00000607841 NUAK2Q9H093 628 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RERGLQ9H628 205 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RNF121Q9H920 327 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 CRNNQ9UBG3 495 aaPredicted RBP12.44□□□□□ -0.42
CTSA-219ENST00000607841 SAC3D1A6NKF1 404 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 RIIAD1A6NNX1 92 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 ABCD4O14678 606 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 BAG2O95816 211 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 CTLA4P16410 223 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 ZNF3P17036 446 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 MSR1P21757 451 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
CTSA-219ENST00000607841 LAP3P28838 519 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 PTDSS1P48651 473 aaKnown RBP12.43□□□□□ -0.42
CTSA-219ENST00000607841 PCBD1P61457 104 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 PIGFQ07326 219 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 GINS1Q14691 196 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 KDM4DQ6B0I6 523 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 ZNF704Q6ZNC4 412 aaPredicted RBP12.43□□□□□ -0.42
CTSA-219ENST00000607841 MDP1Q86V88 176 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 NABP1Q96AH0 204 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
CTSA-219ENST00000607841 CCNB1IP1Q9NPC3 277 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 RPRD1BQ9NQG5 326 aaKnown RBP12.43□□□□□ -0.42
CTSA-219ENST00000607841 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 B9D1Q9UPM9 204 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 FKBP7Q9Y680 259 aa12.43□□□□□ -0.42
CTSA-219ENST00000607841 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 OR6C68A6NDL8 312 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 C12orf71A8MTZ7 269 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 PTHP01270 115 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 CRYAAP02489 173 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 CST2P09228 141 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 IGFBP5P24593 272 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 CENPAP49450 140 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
CTSA-219ENST00000607841 CRISP1P54107 249 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 CDK5Q00535 292 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 GLO1Q04760 184 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 PLP2Q04941 152 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 NPRL3Q12980 569 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ETFDHQ16134 617 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ADAM5Q6NVV9 412 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 SLC22A25Q6T423 547 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 SYT9Q86SS6 491 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ZBTB46Q86UZ6 589 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 OR6V1Q8N148 313 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 PQLC1Q8N2U9 271 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 SLC37A3Q8NCC5 494 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 LURAP1Q96LR2 239 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 RACGAP1Q9H0H5 632 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 CMC2Q9NRP2 79 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ZNF224Q9NZL3 707 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 COA3Q9Y2R0 106 aaPredicted RBP12.42□□□□□ -0.42
CTSA-219ENST00000607841 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
CTSA-219ENST00000607841 ZNF503-AS2A6NEH8 195 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 CECR9P0C854 216 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 PATE4P0C8F1 98 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 PAICSP22234 425 aaKnown RBP12.41□□□□□ -0.42
CTSA-219ENST00000607841 SLC25A1P53007 311 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 KRTAP10-9P60411 292 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
CTSA-219ENST00000607841 PPP2R2BQ00005 443 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 CRMP1Q14194 572 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms