RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PTP4A3O75365 173 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 UBOX5O94941 541 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SERPINA5P05154 406 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 NPR2P20594 1047 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 NR4A1P22736 598 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 GUCA1AP43080 201 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF133P52736 654 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-208ENST00000604743 MRPS34P82930 218 aaKnown RBP12.46□□□□□ -0.41
TUBE1-208ENST00000604743 HSF2Q03933 536 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 ETFDHQ16134 617 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SWI5Q1ZZU3 235 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 CLEC9AQ6UXN8 241 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 ZER1Q7Z7L7 766 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 BIVMQ86UB2 503 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 COX4I2Q96KJ9 171 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 LRGUKQ96M69 825 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 FUZQ9BT04 418 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 OR51B6Q9H340 312 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 RERGLQ9H628 205 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SIAEQ9HAT2 523 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SMURF2Q9HAU4 748 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 PRPF19Q9UMS4 504 aaKnown RBP12.46□□□□□ -0.41
TUBE1-208ENST00000604743 SPEF1Q9Y4P9 236 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 UGT2A1Q9Y4X1 527 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 IER3IP1Q9Y5U9 82 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 TCRBV5S2A0A599 114 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 B9A039 149 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 H7C417 338 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 SOCS2O14508 198 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 GPRIN2O60269 458 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 LY6HO94772 140 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 STAMBPO95630 424 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF35P13682 527 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 PLP2Q04941 152 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 PPP1R8Q12972 351 aaKnown RBP12.45□□□□□ -0.42
TUBE1-208ENST00000604743 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
TUBE1-208ENST00000604743 NRN1LQ496H8 165 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 MESTQ5EB52 335 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 MTX3Q5HYI7 312 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 LCN8Q6JVE9 175 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 DPPA2Q7Z7J5 298 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 FANK1Q8TC84 345 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 FNDC8Q8TC99 324 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 NABP1Q96AH0 204 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 C1orf21Q9H246 121 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 MUC13Q9H3R2 512 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 PLK3Q9H4B4 646 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF442Q9H7R0 627 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 FZR1Q9UM11 496 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 CMAHPQ9Y471 501 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 C2CD3Q4AC94 2353 aa12.45□□□□□ -0.42
TUBE1-208ENST00000604743 ZANQ9Y493 2812 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 IQCMA0A1B0GVH7 501 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 SLC22A23A1A5C7 686 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 TNFRSF11BO00300 401 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 GYG2O15488 501 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 PPP1R3DO95685 299 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
TUBE1-208ENST00000604743 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF32P17041 273 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 CCNOP22674 350 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 LAP3P28838 519 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 IFNGR2P38484 337 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 FXYD6P3P58550 94 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 PABPC1L2AQ5JQF8 200 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 AKR7LQ8NHP1 331 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 GNPDA2Q8TDQ7 276 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 SORCS2Q96PQ0 1159 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 NRIP3Q9NQ35 241 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 CSPG4Q6UVK1 2322 aa12.44□□□□□ -0.42
TUBE1-208ENST00000604743 TLN2Q9Y4G6 2542 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 PRSS37A4D1T9 235 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 IMPA2O14732 288 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 KRT36O76013 467 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 LY6G6DO95868 133 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 PTHP01270 115 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 APEX1P27695 318 aaKnown RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 SDHAP31040 664 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 APLNRP35414 380 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 EFNA4P52798 201 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 EFNB3Q15768 340 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 CARTPTQ16568 116 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 FAM98BQ52LJ0 330 aaKnown RBP12.43□□□□□ -0.42
TUBE1-208ENST00000604743 FAM27BQ5VT28 67 aa12.43□□□□□ -0.42
TUBE1-208ENST00000604743 OTPQ5XKR4 325 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms