RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 C20orf196Q8IYI0 205 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 OR10H5Q8NGA6 315 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 OTOSQ8NHW6 89 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 UFD1Q92890 307 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 TMEM45BQ96B21 275 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 DOK1Q99704 481 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 BCL7BQ9BQE9 202 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 RNF122Q9H9V4 155 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 PARPBPQ9NWS1 579 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 NOSIPQ9Y314 301 aaKnown RBP15.96■□□□□ 0.15
VRK3-225ENST00000601912 ZNF175Q9Y473 711 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 ANKRD11Q6UB99 2663 aaPredicted RBP15.96■□□□□ 0.14
VRK3-225ENST00000601912 A0A1W2PPL8 197 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 OR14I1A6ND48 311 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 SLC22A20A6NK97 555 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 AQP8O94778 261 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 SPARCP09486 303 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 FCGR2AP12318 317 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ALOX5APP20292 161 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 OR12D2P58182 307 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 TPBGQ13641 420 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 DOC2BQ14184 412 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 CNPY1Q3B7I2 92 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 TIMM50Q3ZCQ8 353 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 LIPKQ5VXJ0 399 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 SLC18B1Q6NT16 456 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 FAM180AQ6UWF9 173 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 PLEKHG7Q6ZR37 379 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 KCTD20Q7Z5Y7 419 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 EGFL6Q8IUX8 553 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ZNF454Q8N9F8 522 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 THEM6Q8WUY1 208 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 C12orf43Q96C57 262 aaKnown RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 CDADC1Q9BWV3 514 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 SEC61A2Q9H9S3 476 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 B3GAT2Q9NPZ5 323 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ZNF71Q9NQZ8 489 aaPredicted RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 TUBD1Q9UJT1 453 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ING1Q9UK53 422 aaPredicted RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 IGF2RP11717 2491 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ZNF724A8MTY0 619 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 MRPL33O75394 65 aaKnown RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 GABARAPO95166 117 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 MPZL1O95297 269 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 TACSTD2P09758 323 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 GAAP10253 952 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ZNF133P52736 654 aaPredicted RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 TAS2R43P59537 309 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 TEX30Q5JUR7 227 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 VASH1Q7L8A9 365 aaPredicted RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 PHC2Q8IXK0 858 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 RFLNBQ8N5W9 214 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ASB17Q8WXJ9 295 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 TTTY10Q9BZA0 68 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 ULBP2Q9BZM5 246 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 BCO1Q9HAY6 547 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 FOXD3Q9UJU5 478 aaPredicted RBP15.95■□□□□ 0.14
VRK3-225ENST00000601912 GNG8Q9UK08 70 aa15.95■□□□□ 0.14
VRK3-225ENST00000601912 MGAQ8IWI9 3026 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 A0A1B0GTH9 108 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 H3BMQ9 156 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 AIREO43918 545 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 PSMA1P25786 263 aaKnown RBP15.94■□□□□ 0.14
VRK3-225ENST00000601912 GBX2P52951 348 aaPredicted RBP15.94■□□□□ 0.14
VRK3-225ENST00000601912 EGR3Q06889 387 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 SSX1Q16384 188 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 MEP1BQ16820 701 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 TP53I3Q53FA7 332 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 C10orf128Q5T292 105 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 SLC16A12Q6ZSM3 486 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 FAM220AQ7Z4H9 259 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 GPR137CQ8N3F9 429 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 TTYH2Q9BSA4 534 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 NDUFB11Q9NX14 153 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 LUZP4Q9P127 313 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 KCNG2Q9UJ96 466 aa15.94■□□□□ 0.14
VRK3-225ENST00000601912 NCOR2Q9Y618 2525 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 DHHO43323 396 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 SULT1C4O75897 302 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 KRT8P05787 483 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 YES1P07947 543 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 FAM87AP0C7U9 286 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 GADD45AP24522 165 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 RPS27P42677 84 aaKnown RBP15.93■□□□□ 0.14
VRK3-225ENST00000601912 ZNF84P51523 738 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 GPR50Q13585 617 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 KRTCAP3Q53RY4 240 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 C19orf48Q6RUI8 117 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 P4HA3Q7Z4N8 544 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 TUSC5Q8IXB3 177 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 HAVCR2Q8TDQ0 301 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 C11orf40Q8WZ69 217 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 CALHM2Q9HA72 323 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 GP6Q9HCN6 339 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 ZMIZ1Q9ULJ6 1067 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 KLHDC2Q9Y2U9 406 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 CACNA1GO43497 2377 aa15.93■□□□□ 0.14
VRK3-225ENST00000601912 PNMA8CA0A1B0GUJ8 204 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 OR6C65A6NJZ3 312 aa15.92■□□□□ 0.14
VRK3-225ENST00000601912 WISP2O76076 250 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms