RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 WACQ9BTA9 647 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 OSBPL10Q9BXB5 764 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 SYT4Q9H2B2 425 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 PLEKHF2Q9H8W4 249 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-223ENST00000600523 ST6GALNAC2Q9UJ37 374 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 KLHL21Q9UJP4 597 aa11.35□□□□□ -0.59
SRRM1-223ENST00000600523 SETXQ7Z333 2677 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 CENPEQ02224 2701 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 SOX14O95416 240 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 IGKV3-15P01624 115 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 BMP4P12644 408 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 OSMP13725 252 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 ZNF3P17036 446 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 MSR1P21757 451 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 PAICSP22234 425 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 POU1F1P28069 291 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 GIPRP48546 466 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 FXYD6P3P58550 94 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 GALK2Q01415 458 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 GLO1Q04760 184 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 ZSCAN26Q16670 478 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 ZNF672Q499Z4 452 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 SLC27A4Q6P1M0 643 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 WDFY1Q8IWB7 410 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 SKA3Q8IX90 412 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 ZNF611Q8N823 705 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 KBTBD8Q8NFY9 601 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 OR4F15Q8NGB8 312 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 OR52E2Q8NGJ4 325 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 PYDC1Q8WXC3 89 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 UTP4Q969X6 686 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 NMNAT3Q96T66 252 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 CCL19Q99731 98 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 NIPSNAP1Q9BPW8 284 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 PRRG3Q9BZD7 231 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 PAPOLBQ9NRJ5 636 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 CISD1Q9NZ45 108 aaKnown RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 CRNNQ9UBG3 495 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-223ENST00000600523 POLR1DQ9Y2S0 133 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 ATP23Q9Y6H3 246 aa11.34□□□□□ -0.59
SRRM1-223ENST00000600523 CACNA1DQ01668 2161 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 TMCC2O75069 709 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 IGLV1-44P01699 117 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 HMGN1P05114 100 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 CST2P09228 141 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 CECR9P0C854 216 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 HIST1H1CP16403 213 aaKnown RBP11.33□□□□□ -0.6
SRRM1-223ENST00000600523 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-223ENST00000600523 LAP3P28838 519 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 CDAP32320 146 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 APLNRP35414 380 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRRM1-223ENST00000600523 SCRN3Q0VDG4 424 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 SLC36A3Q495N2 470 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 SLC35F1Q5T1Q4 408 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 UNQ6126/PRO20091Q6UXV3 157 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 FBXL14Q8N1E6 418 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 LNX2Q8N448 690 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 OR10H5Q8NGA6 315 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 OR2T4Q8NH00 348 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 TMEM171Q8WVE6 324 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 PLEKHA8Q96JA3 519 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 NUAK2Q9H093 628 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 CXorf56Q9H5V9 222 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 KRT84Q9NSB2 600 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 B3GNT2Q9NY97 397 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 MOKQ9UQ07 419 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 ORC6Q9Y5N6 252 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 FKBP7Q9Y680 259 aa11.33□□□□□ -0.6
SRRM1-223ENST00000600523 BHLHE40O14503 412 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 PLAUP00749 431 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 SERPINA5P05154 406 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 CTLA4P16410 223 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 PRKACGP22612 351 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
SRRM1-223ENST00000600523 BLVRAP53004 296 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 NAAAQ02083 359 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 TBC1D28Q2M2D7 210 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 AGAP6Q5VW22 663 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 PTCHD4Q6ZW05 846 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 TMEM179BQ7Z7N9 219 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 AMIGO2Q86SJ2 522 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 SYT9Q86SS6 491 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-223ENST00000600523 DHRS9Q9BPW9 319 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 PLA2G12AQ9BZM1 189 aa11.32□□□□□ -0.6
SRRM1-223ENST00000600523 NTN4Q9HB63 628 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms