RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 KBTBD8Q8NFY9 601 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 OR52L1Q8NGH7 329 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 OR52N5Q8NH56 324 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 ZNF519Q8TB69 540 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 DNAJC9Q8WXX5 260 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 Q96MF0 132 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 IFT27Q9BW83 186 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 LINC00470Q9BZP3 86 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 TXNIPQ9H3M7 391 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 TOR3AQ9H497 397 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 BARX1Q9HBU1 254 aaPredicted RBP11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 SLC25A19Q9HC21 320 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 NRIP3Q9NQ35 241 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 SLC17A5Q9NRA2 495 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 NPAP1Q9NZP6 1156 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 NOX1Q9Y5S8 564 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.61
SH2D3A-208ENST00000599563 USF3Q68DE3 2245 aa11.21□□□□□ -0.62
SH2D3A-208ENST00000599563 A0A1W2PRG6 482 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC35F4A4IF30 521 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 OVOL3O00110 214 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 ZNF432O94892 652 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC2A10O95528 541 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 DANCRP0C864 163 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 CD40P25942 277 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 ACVR1BP36896 505 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 ZNF83P51522 516 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 CDH11P55287 796 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 RPL27P61353 136 aaKnown RBP11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 NPRL3Q12980 569 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 PTGES3Q15185 160 aaKnown RBP11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC35F1Q5T1Q4 408 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 AGAP6Q5VW22 663 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 CARD17Q5XLA6 110 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 RPL13AP3Q6NVV1 102 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 DPY19L2P2Q6ZN68 376 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 PTCHD4Q6ZW05 846 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 TMEM123Q8N131 208 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 COX4I2Q96KJ9 171 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 OR2M2Q96R28 347 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 FN3KQ9H479 309 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 POU2F3Q9UKI9 436 aa11.2□□□□□ -0.62
SH2D3A-208ENST00000599563 IGKV1D-43A0A0B4J1Z2 117 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 SHISA9B4DS77 424 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC43A1O75387 559 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 TRMUO75648 421 aaKnown RBP11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 BCL10O95999 233 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 BMP4P12644 408 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 HIST1H1CP16403 213 aaKnown RBP11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 RAD23AP54725 363 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 FOXG1P55316 489 aaPredicted RBP11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 ESRRGP62508 458 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 CDK5Q00535 292 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 MYBPC1Q00872 1141 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 SLX4IPQ5VYV7 408 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 C12orf73Q69YU5 71 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 LINGO2Q7L985 606 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 DTX2Q86UW9 622 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 LNX2Q8N448 690 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 PACRGLQ8N7B6 248 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 SDR9C7Q8NEX9 313 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 NOXO1Q8NFA2 376 aa11.19□□□□□ -0.62
SH2D3A-208ENST00000599563 ZNF469Q96JG9 3925 aaPredicted RBP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 NPIPB13A6NJU9 1138 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 NPIPB4C9JG80 1138 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 M0R1B8 84 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 UPK3AO75631 287 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 CLIC3O95833 236 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 TXNDC12O95881 172 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 SOD3P08294 240 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 PGA4P0DJD7 388 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 PGA3P0DJD8 388 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 ACADSP16219 412 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 SDHAP31040 664 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 GRK5P34947 590 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 VHLP40337 213 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 CDKN2AP42771 156 aaKnown RBP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 RPS6KA3P51812 740 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 UBE2NP61088 152 aaKnown RBP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 FMODQ06828 376 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 SNCBQ16143 134 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 C3orf36Q3SXR2 165 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 C9orf135Q5VTT2 229 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
SH2D3A-208ENST00000599563 SLC27A4Q6P1M0 643 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms