RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MUC20Q8N307 709 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF283Q8N7M2 679 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 OR10S1Q8NGN2 331 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 KLF14Q8TD94 323 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 THOC1Q96FV9 657 aaKnown RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 SLC25A44Q96H78 314 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 C16orf45Q96MC5 204 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TMEM43Q9BTV4 400 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 SSBP3Q9BWW4 388 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 MARCH7Q9H992 704 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TPT1P8Q9HAU6 139 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 BCL2L10Q9HD36 194 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TNFRSF19Q9NS68 423 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 SLC6A13Q9NSD5 602 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 AIG1Q9NVV5 245 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 DCAF16Q9NXF7 216 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 A0A0B4J2E0 115 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 IGHV2-70DA0A0C4DH43 119 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 A0A1B0GX12 115 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 C11orf98E9PRG8 122 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 C3orf80F5H4A9 247 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 MGRN1O60291 552 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 IL6P05231 212 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 MMP7P09237 267 aaPredicted RBP8.5□□□□□ -1.05
TRIM28-210ENST00000597618 QDPRP09417 244 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 ZCCHC18P0CG32 403 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 ETS2P15036 469 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TNFRSF1AP19438 455 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TNFSF4P23510 183 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 IL12AP29459 219 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 WNT5AP41221 380 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF84P51523 738 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 BPIFB3P59826 476 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 KRTAP10-3P60369 221 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 PAX2Q02962 417 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 C2orf68Q2NKX9 166 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 SPRNQ5BIV9 151 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 PABPC1L2AQ5JQF8 200 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 CEP85LQ5SZL2 805 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
TRIM28-210ENST00000597618 NUDCD3Q8IVD9 361 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 BHLHE22Q8NFJ8 381 aaPredicted RBP8.5□□□□□ -1.05
TRIM28-210ENST00000597618 SLC25A40Q8TBP6 338 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 ARHGDIGQ99819 225 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 NUF2Q9BZD4 464 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 CHIAQ9BZP6 476 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 OR2J1Q9GZK6 312 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 KCNN2Q9H2S1 579 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TMEM27Q9HBJ8 222 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TCF7L1Q9HCS4 588 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 ASH2LQ9UBL3 628 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 RAP2CQ9Y3L5 183 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 POMT1Q9Y6A1 747 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TANC2Q9HCD6 1990 aa8.5□□□□□ -1.05
TRIM28-210ENST00000597618 TLDC2A0PJX2 215 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 C5orf49A4QMS7 147 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 CEACAM18A8MTB9 384 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 RNF13O43567 381 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ITM2AO43736 263 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 TIMM8AO60220 97 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 CLPXO76031 633 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 IGHG1P01857 330 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 SERPINE1P05121 402 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ALDOCP09972 364 aaKnown RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 GDI2P50395 445 aaKnown RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 RPL14P50914 215 aaKnown RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 CLRN1P58418 232 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ABCE1P61221 599 aaKnown RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 PPP1CBP62140 327 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 HNRNPA0Q13151 305 aaKnown RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 CDK5R2Q13319 367 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 MELKQ14680 651 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 GPR157Q5UAW9 335 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 DHRS4L2Q6PKH6 230 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 Q6YL49 198 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF620Q6ZNG0 422 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 Q6ZPA2 131 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 RFPL4BQ6ZWI9 263 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 REC114Q7Z4M0 266 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ZER1Q7Z7L7 766 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 LRRC18Q8N456 261 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 FAM110DQ8TAY7 271 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 ABHD4Q8TB40 342 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 RAB40AQ8WXH6 277 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 MAL2Q969L2 176 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 FAM71F1Q96KD3 344 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-210ENST00000597618 POM121L2Q96KW2 1035 aa8.49□□□□□ -1.05
TRIM28-210ENST00000597618 SAMD8Q96LT4 415 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms