RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 C1orf198Q9H425 327 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SIGLEC7Q9Y286 467 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 SNAP29O95721 258 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 PTHP01270 115 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 CSF3P09919 207 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 T-ENOLP0DO92 83 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 SLC25A16P16260 332 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 SMIM11AP58511 58 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 FMODQ06828 376 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 CD47Q08722 323 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 TOP3AQ13472 1001 aaPredicted RBP11.25□□□□□ -0.61
USE1-207ENST00000596136 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 KRT80Q6KB66 452 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 IGFN1Q86VF2 1251 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 MRPL24Q96A35 216 aaKnown RBP11.25□□□□□ -0.61
USE1-207ENST00000596136 FAM46AQ96IP4 442 aaKnown RBP11.25□□□□□ -0.61
USE1-207ENST00000596136 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 NRIP3Q9NQ35 241 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 SLC7A8Q9UHI5 535 aa11.25□□□□□ -0.61
USE1-207ENST00000596136 JMJD1CQ15652 2540 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 SLC22A23A1A5C7 686 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 B2RBV5 119 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 GPRIN2O60269 458 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 DIRAS1O95057 198 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 NDUFB2O95178 105 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 PCSK6P29122 969 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 CDAP32320 146 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 HMGA2P52926 109 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 FXYD6P3P58550 94 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 RPS23P62266 143 aaKnown RBP11.24□□□□□ -0.61
USE1-207ENST00000596136 ERVK-25P63136 954 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
USE1-207ENST00000596136 FGD3Q5JSP0 725 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 SVOPLQ8N434 492 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 CLDN22Q8N7P3 220 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 SLC30A7Q8NEW0 376 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 FAM168AQ92567 244 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 GPA33Q99795 319 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 MRPL37Q9BZE1 423 aaKnown RBP11.24□□□□□ -0.61
USE1-207ENST00000596136 RNF121Q9H920 327 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 MYOZ1Q9NP98 299 aaPredicted RBP11.24□□□□□ -0.61
USE1-207ENST00000596136 ACTR3BQ9P1U1 418 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 ADAM18Q9Y3Q7 739 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
USE1-207ENST00000596136 NDUFS8O00217 210 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 LY6HO94772 140 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 GADD45GO95257 159 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 TXNDC12O95881 172 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 CST2P09228 141 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 CALB2P22676 271 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 RPL4P36578 427 aaKnown RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 MXRA7P84157 204 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 GALK2Q01415 458 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 PLP2Q04941 152 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 MESTQ5EB52 335 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 MTX3Q5HYI7 312 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 GPR139Q6DWJ6 353 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 ZER1Q7Z7L7 766 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 SYT9Q86SS6 491 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 LRRC18Q8N456 261 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 OR1J2Q8NGS2 313 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 OR52J3Q8NH60 311 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 NEU4Q8WWR8 484 aaPredicted RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 NSMAFQ92636 917 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 RSRC1Q96IZ7 334 aaKnown RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 Q96M85 177 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 VRK1Q99986 396 aaPredicted RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 WACQ9BTA9 647 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 KCNN2Q9H2S1 579 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 MUC13Q9H3R2 512 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
USE1-207ENST00000596136 GRHPRQ9UBQ7 328 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 ADAM21Q9UKJ8 722 aa11.23□□□□□ -0.61
USE1-207ENST00000596136 IQCMA0A1B0GVH7 501 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 UNC119BA6NIH7 251 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 SYNGR3O43761 229 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 CD5LO43866 347 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 FABP3P05413 133 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 APEHP13798 732 aaKnown RBP11.22□□□□□ -0.61
USE1-207ENST00000596136 ZNF250P15622 560 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 ZNF32P17041 273 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 SDHAP31040 664 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms