RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GLB1L2Q8IW92 636 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 MCEMP1Q8IX19 187 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ZNF485Q8NCK3 441 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 OR2T27Q8NH04 317 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 NSMAFQ92636 917 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 FCGR1BQ92637 280 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 GMPPAQ96IJ6 420 aaPredicted RBP13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 MNTQ99583 582 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 YIPF3Q9GZM5 350 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 COPS3Q9UNS2 423 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 ZNF835Q9Y2P0 537 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 NBEAQ8NFP9 2946 aa13.03□□□□□ -0.32
SHKBP1-211ENST00000595945 BSNQ9UPA5 3926 aa13.02□□□□□ -0.32
SHKBP1-211ENST00000595945 MBD3L4A6NDZ8 208 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 MBD3L3A6NE82 208 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 MBD3L5A6NJ08 208 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 OR6C65A6NJZ3 312 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 DHHO43323 396 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 SCG5P05408 212 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 GABRA1P14867 456 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 MYL12AP19105 171 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 LAP3P28838 519 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 GP2P55259 537 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 GALEQ14376 348 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 STK11Q15831 433 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 NEDD8Q15843 81 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 TEX30Q5JUR7 227 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 SYT6Q5T7P8 510 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 C1orf185Q5T7R7 199 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 SEM1Q6ZVN7 128 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 LINGO2Q7L985 606 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 OR52N1Q8NH53 320 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 MBD3L2Q8NHZ7 208 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 INTS14Q96SY0 518 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 WDR76Q9H967 626 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 ERGIC3Q9Y282 383 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.33
SHKBP1-211ENST00000595945 A0A1W2PQL4 384 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 A6NHS1 94 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 RPL36A-HNRNPH2H7BZ11 118 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 INMTO95050 263 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 MPZL1O95297 269 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 TPOP07202 933 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 CD79BP40259 229 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 ENTPD1P49961 510 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 HCCSP53701 268 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 LY6DQ14210 128 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 TSPO2Q5TGU0 170 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 RPTNQ6XPR3 784 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 SSX6Q7RTT6 188 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 LHFPL3Q86UP9 236 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 RFLNBQ8N5W9 214 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 OR10H4Q8NGA5 316 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 OR6N2Q8NGY6 317 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 CPT1CQ8TCG5 803 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 C11orf40Q8WZ69 217 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 RORBQ92753 470 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 TBX5Q99593 518 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 ULBP2Q9BZM5 246 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 GPR35Q9HC97 309 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 B3GAT2Q9NPZ5 323 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 POLE4Q9NR33 117 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 CHCHD3Q9NX63 227 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 KLHDC2Q9Y2U9 406 aa13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 CAB39Q9Y376 341 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-211ENST00000595945 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 DAPL1A0PJW8 107 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 FIGNL2A6NMB9 653 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 PRR32B1ATL7 298 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF593O00488 134 aaPredicted RBP13□□□□□ -0.33
SHKBP1-211ENST00000595945 MYL12BO14950 172 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 SEC14L2O76054 403 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 EDN3P14138 238 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ABOP16442 354 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ALOX5APP20292 161 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 OR3A2P47893 321 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 RAB39AQ14964 217 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 MEP1BQ16820 701 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF684Q5T5D7 378 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 OR2G6Q5TZ20 316 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 OR2A2Q6IF42 318 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms