RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	OR2T1	O43869	369 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CCDC22	O60826	627 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	SLC43A1	O75387	559 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TSPAN15	O95858	294 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	GALK2	Q01415	458 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	GSG1	Q2KHT4	349 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ENTPD8	Q5MY95	495 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ERICH5	Q6P6B1	374 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TMEM154	Q6P9G4	183 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF613	Q6PF04	617 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726		Q6ZPA2	131 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RBM45	Q8IUH3	476 aa	Known RBP	11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF417	Q8TAU3	575 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	B3GAT1	Q9P2W7	334 aa		11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF346	Q9UL40	294 aa	Known RBP	11.64	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ISPD	A4D126	451 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	FAM181B	A6NEQ2	426 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CPSF4L	A6NMK7	179 aa	Known RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726		M0R3G1	203 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	AIM2	O14862	343 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	LYPD3	O95274	346 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	BGLAP	P02818	100 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	THY1	P04216	161 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	FAM157B	P0CG42	384 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	IGHV4-38-2	P0DP08	117 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	COX4I1	P13073	169 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CBL	P22681	906 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	GRPR	P30550	384 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	PTDSS1	P48651	473 aa	Known RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RELB	Q01201	579 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TST	Q16762	297 aa	Known RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	LINC00114	Q6XXX2	140 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	WDR88	Q6ZMY6	472 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CCDC36	Q8IYA8	594 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ADPRHL1	Q8NDY3	354 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ANKK1	Q8NFD2	765 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	OR6S1	Q8NH40	331 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ADAMTS16	Q8TE57	1224 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RAB1C	Q92928	201 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	EPYC	Q99645	322 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ELAC2	Q9BQ52	826 aa	Known RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TMEM43	Q9BTV4	400 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	PCDHAC1	Q9H158	963 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	OR51B6	Q9H340	312 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	BEX1	Q9HBH7	125 aa		11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	PURG	Q9UJV8	347 aa	Known RBP	11.63	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF99	A8MXY4	864 aa	Predicted RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TIMM23	O14925	209 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	HOXA3	O43365	443 aa	Predicted RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TRAF3IP2	O43734	574 aa	Predicted RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	PATE4	P0C8F1	98 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	VSIG8	P0DPA2	414 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF43	P17038	809 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	MAK	P20794	623 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	LSP1	P33241	339 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	GIPR	P48546	466 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RAG2	P55895	527 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ERVS71-1	P61550	626 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RPS23	P62266	143 aa	Known RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RAB1A	P62820	205 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF154	Q13106	437 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RAB39A	Q14964	217 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	MFSD13A	Q14CX5	517 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	HFE	Q30201	348 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CARD17	Q5XLA6	110 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	OLFML2A	Q68BL7	652 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	H1FNT	Q75WM6	255 aa	Predicted RBP	11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ARPIN	Q7Z6K5	226 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	OR2T12	Q8NG77	320 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CCL17	Q92583	94 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	SLC41A3	Q96GZ6	507 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TIMD4	Q96H15	378 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	OXGR1	Q96P68	337 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	MOGAT1	Q96PD6	335 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	FAM107B	Q9H098	131 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	MYLK2	Q9H1R3	596 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CMTM6	Q9NX76	183 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF224	Q9NZL3	707 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	SLC7A7	Q9UM01	511 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RCE1	Q9Y256	329 aa		11.62	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ELOVL7	A1L3X0	281 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TRAPPC13	A5PLN9	417 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	LRRN3	E7EW58	273 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726		G3V4G9	280 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	SNX3	O60493	162 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	CCL2	P13500	99 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TNFRSF1B	P20333	461 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	DRD4	P21917	467 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	TEK	Q02763	1124 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	GLO1	Q04760	184 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	PCGF3	Q3KNV8	242 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	LRRC23	Q53EV4	343 aa	Predicted RBP	11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF813	Q6ZN06	617 aa		11.61	□□□□□ -0.55
SHKBP1-208	ENST00000595726	ZNF584	Q8IVC4	421 aa		11.61	□□□□□ -0.55

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