RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TIMM50Q3ZCQ8 353 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 CYB5R2Q6BCY4 276 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 APOOLQ6UXV4 268 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 IL17RELQ6ZVW7 336 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 TUBA1AQ71U36 451 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 PRR22Q8IZ63 422 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 CADM2Q8N3J6 435 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 RNF138Q8WVD3 245 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 OMA1Q96E52 524 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 BARX1Q9HBU1 254 aaPredicted RBP11.32□□□□□ -0.6
SCAF1-202ENST00000595242 TAS2R10Q9NYW0 307 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 OSGIN1Q9UJX0 560 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 PROCRQ9UNN8 238 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 A3GALT2U3KPV4 340 aa11.32□□□□□ -0.6
SCAF1-202ENST00000595242 PLCE1Q9P212 2302 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 IGKV1D-42A0A075B6H8 117 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 OR6C70A6NIJ9 312 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 J3QRE1 110 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 MYL12BO14950 172 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 FADS1O60427 444 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 REM1O75628 298 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 OR7A10O76100 309 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 SAGP10523 405 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 HPGDP15428 266 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NAGAP17050 411 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 EGR1P18146 543 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 FUT1P19526 365 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NR4A1P22736 598 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 DPP4P27487 766 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 ABCD3P28288 659 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 IL12BP29460 328 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 VBP1P61758 197 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NCS1P62166 190 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 MED22Q15528 200 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 SSX1Q16384 188 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 DGUOKQ16854 277 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 ANKDD1AQ495B1 522 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NIPAL3Q6P499 406 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF485Q8NCK3 441 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NDNFQ8TB73 568 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 PHOSPHO1Q8TCT1 267 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 RPL3LQ92901 407 aaKnown RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 GPX7Q96SL4 187 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-202ENST00000595242 ADOQ96SZ5 270 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 GALNT9Q9HCQ5 603 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 CLEC2DQ9UHP7 191 aa11.31□□□□□ -0.6
SCAF1-202ENST00000595242 NDUFB2O95178 105 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 SLC2A10O95528 541 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 CH25HO95992 272 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 TSPAN19P0C672 248 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 PEPDP12955 493 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 MYL12AP19105 171 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 PTNP21246 168 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 SLC2A5P22732 501 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 PTGDSP41222 190 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 ETV1P50549 477 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 WNT4P56705 351 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF117Q03924 483 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 EFR3AQ14156 821 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 TSTQ16762 297 aaKnown RBP11.3□□□□□ -0.6
SCAF1-202ENST00000595242 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
SCAF1-202ENST00000595242 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 STAC2Q6ZMT1 411 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 OAFQ86UD1 273 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 MISPQ8IVT2 679 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 KISS1RQ969F8 398 aaPredicted RBP11.3□□□□□ -0.6
SCAF1-202ENST00000595242 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 PLGRKTQ9HBL7 147 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 HAO2Q9NYQ3 351 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
SCAF1-202ENST00000595242 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 CARD8Q9Y2G2 431 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
SCAF1-202ENST00000595242 TRAV27A0A087WT01 109 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ELOA3DA6NLF2 546 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms