RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ZNF321PQ8N8H1 164 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 TMEM185AQ8NFB2 350 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 TRMT10AQ8TBZ6 339 aaKnown RBP13.95□□□□□ -0.18
PNKP-204ENST00000594661 PTPMT1Q8WUK0 201 aaPredicted RBP13.95□□□□□ -0.18
PNKP-204ENST00000594661 THAP4Q8WY91 577 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 SAMD8Q96LT4 415 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 OR1F2PQ96R84 312 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 DPH1Q9BZG8 443 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 EGLN1Q9GZT9 426 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 PNO1Q9NRX1 252 aaKnown RBP13.95□□□□□ -0.18
PNKP-204ENST00000594661 TAS2R5Q9NYW4 299 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 RASD1Q9Y272 281 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 FER1L5A0AVI2 2057 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 IGKV3D-11A0A0A0MRZ8 115 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 A0A1B0GV90 55 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 PRKNO60260 465 aaPredicted RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 CREBL2O60519 120 aaPredicted RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 ICOSLGO75144 302 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 CD63P08962 238 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 HPGDP15428 266 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 CELP19835 753 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 PAX6P26367 422 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 SLC1A3P43003 542 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 MECP2P51608 486 aaKnown RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 CDH11P55287 796 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 PON3Q15166 354 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 KLHL26Q53HC5 615 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 VWA2Q5GFL6 755 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 BAIAP2L2Q6UXY1 529 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 KLBQ86Z14 1044 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 DMRTC2Q8IXT2 367 aaPredicted RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 OR2T33Q8NG76 320 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 PFN4Q8NHR9 129 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 TMEM239Q8WW34 195 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 PMM1Q92871 262 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 ADAT1Q9BUB4 502 aaKnown RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 MMACHCQ9Y4U1 282 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 A0A1B0GX78 115 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 NAP1L6A6NFF2 107 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 UNC119BA6NIH7 251 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 CBR1P16152 277 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 MGMTP16455 207 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 GALNSP34059 522 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 NUBP1P53384 320 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 SPCS3P61009 180 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 ARHGAP40Q5TG30 622 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 SFXN4Q6P4A7 337 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 MED25Q71SY5 747 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 RFKQ969G6 155 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 GPN1Q9HCN4 374 aaPredicted RBP13.94□□□□□ -0.18
PNKP-204ENST00000594661 Q9N2J8 555 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 ZNF69Q9UC07 566 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 NUP210LQ5VU65 1888 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 SEC16AO15027 2179 aa13.94□□□□□ -0.18
PNKP-204ENST00000594661 FXYD6-FXYD2A0A087WZ82 144 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 C9orf170A2RU37 121 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 COLCA2A8K830 154 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 DVL2O14641 736 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 TERTO14746 1132 aaKnown RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 FMO6PO60774 539 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 SLC2A10O95528 541 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 FUT1P19526 365 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 NOS3P29474 1203 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 CCR9P51686 369 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 DLX5P56178 289 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 RNASE12Q5GAN4 147 aaKnown RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 C9orf152Q5JTZ5 239 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 NAA40Q86UY6 237 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 PRSS58Q8IYP2 241 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 ZSCAN1Q8NBB4 408 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 THEM6Q8WUY1 208 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 SMIM4Q8WVI0 70 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 ZC3H10Q96K80 434 aaKnown RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 LMF1Q96S06 567 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 OR10A4Q9H209 315 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 C20orf141Q9NUB4 165 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 MED17Q9NVC6 651 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 ZNF223Q9UK11 482 aaPredicted RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 A0A0G2JK05 382 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 ARPC1BO15143 372 aaKnown RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 TOX3O15405 576 aaPredicted RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 SLC31A2O15432 143 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 LYPD3O95274 346 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 MAKP20794 623 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 LAP3P28838 519 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 TAS2R60P59551 318 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 SQSTM1Q13501 440 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 AADACL4Q5VUY2 407 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 BCORP1Q8N888 145 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 GRHL3Q8TE85 626 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 FAM117AQ9C073 453 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 OR52D1Q9H346 318 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 UBQLN3Q9H347 655 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 OPA3Q9H6K4 179 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 PLEKHA1Q9HB21 404 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms