RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF670-ZNF695F2Z2N8 137 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 J3QLW9 94 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 KHDRBS3O75525 346 aaKnown RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 GPX5O75715 221 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 ZNF19P17023 458 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 GABRA5P31644 462 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 PTGS2P35354 604 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 CRYBB2P43320 205 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 BLVRAP53004 296 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 TAS2R43P59537 309 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 TUBA1BP68363 451 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 GLO1Q04760 184 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 DGUOKQ16854 277 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 PLXDC2Q6UX71 529 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 TUBA1AQ71U36 451 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 ZFP41Q8N8Y5 198 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 ABHD3Q8WU67 409 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 C4orf36Q96KX1 117 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 INTS14Q96SY0 518 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 MRPL22Q9NWU5 206 aaKnown RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 ING1Q9UK53 422 aaPredicted RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 CAMK2AQ9UQM7 478 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 BOD1L1Q8NFC6 3051 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 CELP19835 753 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 SERPINB10P48595 397 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 SELENOPP49908 381 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 SOWAHCQ53LP3 525 aaPredicted RBP13.47□□□□□ -0.25
VRK3-207ENST00000594092 VASH1Q7L8A9 365 aaPredicted RBP13.47□□□□□ -0.25
VRK3-207ENST00000594092 CDC20BQ86Y33 519 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 SNX33Q8WV41 574 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 NSMAFQ92636 917 aa13.47□□□□□ -0.25
VRK3-207ENST00000594092 PRRC2CQ9Y520 2896 aaKnown RBP13.47□□□□□ -0.25
VRK3-207ENST00000594092 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 AQP7O14520 342 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 AQP8O94778 261 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 PSKH1P11801 424 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 NTF4P34130 210 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 CSNK1A1P48729 337 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 OR12D2P58182 307 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 RPS25P62851 125 aaKnown RBP13.46□□□□□ -0.25
VRK3-207ENST00000594092 GPR50Q13585 617 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 INAQ16352 499 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 CDONQ4KMG0 1287 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 OTPQ5XKR4 325 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 LRFN4Q6PJG9 635 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 SLC25A47Q6Q0C1 308 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 CHMP1BQ7LBR1 199 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 OR6N2Q8NGY6 317 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 FNDC8Q8TC99 324 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 TMEM54Q969K7 222 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 MCHR2Q969V1 340 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 MNTQ99583 582 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 TTTY10Q9BZA0 68 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 PRDM14Q9GZV8 571 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 RNF167Q9H6Y7 350 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 GLTPQ9NZD2 209 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 RCE1Q9Y256 329 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 SF3B6Q9Y3B4 125 aaKnown RBP13.46□□□□□ -0.25
VRK3-207ENST00000594092 ATMQ13315 3056 aa13.46□□□□□ -0.25
VRK3-207ENST00000594092 SPENQ96T58 3664 aaKnown RBP13.46□□□□□ -0.26
VRK3-207ENST00000594092 CHD8Q9HCK8 2581 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 CLPXO76031 633 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 MPZL1O95297 269 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 QDPRP09417 244 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 GAAP10253 952 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 RPS27P42677 84 aaKnown RBP13.46□□□□□ -0.26
VRK3-207ENST00000594092 MEP1BQ16820 701 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 PHYHD1Q5SRE7 291 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.26
VRK3-207ENST00000594092 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 SLC26A10Q8NG04 563 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 OR6N1Q8NGY5 312 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 ZCCHC14Q8WYQ9 949 aaKnown RBP13.46□□□□□ -0.26
VRK3-207ENST00000594092 TMEM203Q969S6 136 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 LUZP4Q9P127 313 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.26
VRK3-207ENST00000594092 ZMIZ1Q9ULJ6 1067 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 KLHDC2Q9Y2U9 406 aa13.46□□□□□ -0.26
VRK3-207ENST00000594092 ZNF593O00488 134 aaPredicted RBP13.45□□□□□ -0.26
VRK3-207ENST00000594092 NR2C1P13056 603 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 GBX2P52951 348 aaPredicted RBP13.45□□□□□ -0.26
VRK3-207ENST00000594092 TP53I3Q53FA7 332 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 C20orf196Q8IYI0 205 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 PNPLA2Q96AD5 504 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 PRRG4Q9BZD6 226 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 ZNF71Q9NQZ8 489 aaPredicted RBP13.45□□□□□ -0.26
VRK3-207ENST00000594092 KLHL9Q9P2J3 617 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 LAMP5Q9UJQ1 280 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 GNG8Q9UK08 70 aa13.45□□□□□ -0.26
VRK3-207ENST00000594092 TMEM14AQ9Y6G1 99 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms