RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 FAHD2AQ96GK7 314 aa9.05□□□□□ -0.96
USE1-203ENST00000593597 MARS2Q96GW9 593 aaKnown RBP9.05□□□□□ -0.96
USE1-203ENST00000593597 SLC6A7Q99884 636 aa9.05□□□□□ -0.96
USE1-203ENST00000593597 SLC19A3Q9BZV2 496 aa9.05□□□□□ -0.96
USE1-203ENST00000593597 RNF121Q9H920 327 aa9.05□□□□□ -0.96
USE1-203ENST00000593597 BLOC1S5-TXNDC5H3BN57 136 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 OR7A10O76100 309 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 UBOX5O94941 541 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 BCL10O95999 233 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 IGHG1P01857 330 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 MT-ND1P03886 318 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 SCG5P05408 212 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 ACADSP16219 412 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 ZNF32P17041 273 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 CLRN1P58418 232 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 FHL1Q13642 323 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 TBC1D28Q2M2D7 210 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 VMACQ2NL98 169 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 SLC36A2Q495M3 483 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 TMEM154Q6P9G4 183 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 SLC25A47Q6Q0C1 308 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 CALHM3Q86XJ0 350 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 ICA1LQ8NDH6 482 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 OR1J1Q8NGS3 322 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 AKR7LQ8NHP1 331 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 STON2Q8WXE9 905 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 MPP4Q96JB8 637 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 WNT5BQ9H1J7 359 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 POFUT1Q9H488 388 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 PCDHB10Q9UN67 800 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 NDUFAF1Q9Y375 327 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 VWFP04275 2813 aa9.04□□□□□ -0.96
USE1-203ENST00000593597 SLC22A23A1A5C7 686 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 KCNAB3O43448 404 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SPRY3O43610 288 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 FARS2O95363 451 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 NGFP01138 241 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 UMPSP11172 480 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ZFP36P26651 326 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 STOMP27105 288 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 LSP1P33241 339 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ZNF81P51508 661 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ERVK-25P63136 954 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ACTG1P63261 375 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 MRPS34P82930 218 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 PSG4Q00888 419 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 PIN1Q13526 163 aaPredicted RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 NFYCQ13952 458 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 PCGF3Q3KNV8 242 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 THEM4Q5T1C6 240 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ACSM5Q6NUN0 579 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SHQ1Q6PI26 577 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 FOXL2NBQ6ZUU3 175 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 PATL1Q86TB9 770 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 LRRC75AQ8NAA5 344 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SLC25A40Q8TBP6 338 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 ZNF418Q8TF45 676 aaPredicted RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 LIPHQ8WWY8 451 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 GEMIN6Q8WXD5 167 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 C11orf40Q8WZ69 217 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 DVL3Q92997 716 aaPredicted RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 BCL2L14Q9BZR8 327 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 OR2J1Q9GZK6 312 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 C1orf198Q9H425 327 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 NANOGQ9H9S0 305 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SAP30LQ9HAJ7 183 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SIAEQ9HAT2 523 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 INIPQ9NRY2 104 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 SLCO1C1Q9NYB5 712 aa9.03□□□□□ -0.96
USE1-203ENST00000593597 GMPR2Q9P2T1 348 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 PRKDCP78527 4128 aaKnown RBP9.03□□□□□ -0.96
USE1-203ENST00000593597 IQCMA0A1B0GVH7 501 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 C5orf49A4QMS7 147 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 CENPBD1B2RD01 187 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 CLDN25C9JDP6 229 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 SPRY1O43609 319 aaPredicted RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 ICMTO60725 284 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 IGF2P01344 180 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 ADH4P08319 380 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 CCNOP22674 350 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 RAD52P43351 418 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 OR1E2P47887 323 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 ZNF84P51523 738 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 SEC61A1P61619 476 aaKnown RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 ENDOGQ14249 297 aaKnown RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 Q6ZR03 302 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 DPPA2Q7Z7J5 298 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 IGFN1Q86VF2 1251 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 KLF14Q8TD94 323 aaPredicted RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 TMEM239Q8WW34 195 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 C22orf15Q8WYQ4 148 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 NSMAFQ92636 917 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 SGTBQ96EQ0 304 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms