RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 PGAM2P15259 253 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 SLC2A5P22732 501 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 GNALP38405 381 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 MRPS10P82664 201 aaKnown RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 DHRS2Q13268 280 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 CSRP2Q16527 193 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ITPRIPL2Q3MIP1 535 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 BEND4Q6ZU67 534 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 MCATQ8IVS2 390 aaKnown RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 CDRT4Q8N9R6 151 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF563Q8TA94 476 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 PHOSPHO1Q8TCT1 267 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 GPR148Q8TDV2 347 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 RERGQ96A58 199 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF251Q9BRH9 671 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 TMPRSS13Q9BYE2 586 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 TAS2R8Q9NYW2 309 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 GRHPRQ9UBQ7 328 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 SNRNP200O75643 2136 aaKnown RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 P2RX6O15547 441 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF208O43345 1280 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 XRCC3O43542 346 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 CTAG2O75638 210 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 GP1BAP07359 652 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 LAG3P18627 525 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 MPGP29372 298 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 EIF1AXP47813 144 aaKnown RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 S100A10P60903 97 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 FAM53BQ14153 422 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF658BQ4V348 819 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 SLC36A1Q7Z2H8 476 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 CCL4L1Q8NHW4 92 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
CIRBP-242ENST00000593093 RBM18Q96H35 190 aaKnown RBP12.96□□□□□ -0.33
CIRBP-242ENST00000593093 A0A0D9SG52 128 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 TYRP1P17643 537 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 ITGA3P26006 1051 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 PCP4P48539 62 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.34
CIRBP-242ENST00000593093 IRF4Q15306 451 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 SSX2Q16385 188 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 EEF1A1P5Q5VTE0 462 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 TMEM52Q8NDY8 209 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 ELP5Q8TE02 316 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 SPACA7Q96KW9 195 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 TRIM2Q9C040 744 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.34
CIRBP-242ENST00000593093 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.34
CIRBP-242ENST00000593093 TRAV14DV4A0A0A6YYC5 116 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 OR6C65A6NJZ3 312 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ADH1CP00326 375 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 CEBPBP17676 345 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 CTNNB1P35222 781 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ILF3Q12906 894 aaKnown RBP eCLIP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 TGIF1Q15583 401 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 VN1R4Q7Z5H5 301 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ZNF584Q8IVC4 421 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 OR6N1Q8NGY5 312 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 GAREM1Q9H706 876 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 LRIT1Q9P2V4 623 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 MRM2Q9UI43 246 aaKnown RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 OTOL1A6NHN0 477 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 OR2T1O43869 369 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 AQP8O94778 261 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ITGA5P08648 1049 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 CEBPGP53567 150 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 RNASE10Q5GAN6 216 aaKnown RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 AVPI1Q5T686 147 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ETV3LQ6ZN32 361 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 GVQW1Q8N7I0 195 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 LCORQ96JN0 433 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 RHOVQ96L33 236 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■□□□ 13.8
CIRBP-242ENST00000593093 CENPMQ9NSP4 180 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 NDRG3Q9UGV2 375 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 WRBO00258 174 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 SERPINA5P05154 406 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 CALCBP10092 127 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 S100PP25815 95 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-242ENST00000593093 NPEPL1Q8NDH3 523 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 OR1J4Q8NGS1 313 aa12.95□□□□□ -0.34
CIRBP-242ENST00000593093 SLC2A12Q8TD20 617 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms