RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CUBNO60494 3623 aa13.94□□□□□ -0.18
CIRBP-241ENST00000593048 BLOC1S5-TXNDC5H3BN57 136 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 FARS2O95363 451 aaKnown RBP13.93□□□□□ -0.18
CIRBP-241ENST00000593048 BCL10O95999 233 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 TGFAP01135 160 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 THY1P04216 161 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 HNF1AP20823 631 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 GLRXP35754 106 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 TAS2R41P59536 307 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 RPS23P62266 143 aaKnown RBP13.93□□□□□ -0.18
CIRBP-241ENST00000593048 GK3PQ14409 553 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 MELKQ14680 651 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 RAB39AQ14964 217 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 TAF11Q15544 211 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 ATP6AP1Q15904 470 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 ARIH2OSQ8N7S6 290 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 UBASH3BQ8TF42 649 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 TMEM54Q969K7 222 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 MRPL24Q96A35 216 aaKnown RBP13.93□□□□□ -0.18
CIRBP-241ENST00000593048 SLC25A44Q96H78 314 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-241ENST00000593048 C9orf16Q9BUW7 83 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 RNF121Q9H920 327 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 ARFGEF3Q5TH69 2177 aa13.93□□□□□ -0.18
CIRBP-241ENST00000593048 LRP5LA4QPB2 252 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 M0R233 179 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-241ENST00000593048 SYNGR3O43761 229 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 PRSS23O95084 383 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 LYPD3O95274 346 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 PATE4P0C8F1 98 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 OR8G3PP0DMU2 310 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF35P13682 527 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 SRD5A1P18405 259 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 IGFBP5P24593 272 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 KDELR2P33947 212 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 EVX1P49640 407 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 CHN2P52757 468 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 CLRN1P58418 232 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 CARM1Q86X55 608 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 SKA3Q8IX90 412 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF786Q8N393 782 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 SLC22A24Q8N4F4 322 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 EME1Q96AY2 570 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 PYURFQ96I23 114 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 PKP2Q99959 881 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 SYT3Q9BQG1 590 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 MRPL37Q9BZE1 423 aaKnown RBP13.92□□□□□ -0.18
CIRBP-241ENST00000593048 MS4A5Q9H3V2 200 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF224Q9NZL3 707 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 REV1Q9UBZ9 1251 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 BAG5Q9UL15 447 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 RAB26Q9ULW5 256 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 AURKCQ9UQB9 309 aa13.92□□□□□ -0.18
CIRBP-241ENST00000593048 A0A1W2PRG6 482 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 MCIDASD6RGH6 385 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 DHHO43323 396 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 IGHG1P01857 330 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 QDPRP09417 244 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 ASAH2BP0C7U1 165 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 GIFP27352 417 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 FAM120AOSQ5T036 256 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 TMEM53Q6P2H8 277 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 DEF8Q6ZN54 512 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 CBLL1Q75N03 491 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF75AQ96N20 296 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 SH3GL3Q99963 347 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 CHID1Q9BWS9 393 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 TMEM38BQ9NVV0 291 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 DUSP13Q9UII6 198 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 FZR1Q9UM11 496 aa13.91□□□□□ -0.18
CIRBP-241ENST00000593048 MT-ND1P03886 318 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 SERPINA5P05154 406 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 F13BP05160 661 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 PGA4P0DJD7 388 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 PGA3P0DJD8 388 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 NCK1P16333 377 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 FUT1P19526 365 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
CIRBP-241ENST00000593048 MAGEA2P43356 314 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF84P51523 738 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 LRFN4Q6PJG9 635 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 IZUMO2Q6UXV1 221 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 SLC16A14Q7RTX9 510 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 TSPYL5Q86VY4 417 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-241ENST00000593048 PHC2Q8IXK0 858 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 OR4K5Q8NGD3 323 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 LRTOMTQ8WZ04 291 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 LZICQ8WZA0 190 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 RDH12Q96NR8 316 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 SNX18Q96RF0 628 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 NR1H4Q96RI1 486 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-241ENST00000593048 PRSS27Q9BQR3 290 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 ZNF426Q9BUY5 554 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 MEPEQ9NQ76 525 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-241ENST00000593048 DNAJB9Q9UBS3 223 aa13.9□□□□□ -0.18
CIRBP-241ENST00000593048 A0A1W2PPW3 197 aa13.89□□□□□ -0.19
CIRBP-241ENST00000593048 SLC22A23A1A5C7 686 aa13.89□□□□□ -0.19
CIRBP-241ENST00000593048 LYNX1G3V0Z9 82 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms