RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 UBDO15205 165 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 SMPD2O60906 423 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 LYZL6O75951 148 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 PMS2P2O95744 297 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 IL1AP01583 271 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 IL6P05231 212 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 HNRNPCP07910 306 aaKnown RBP eCLIP6.56□□□□□ -1.364e-19■■■□□ 18.9
VMP1-213ENST00000591877 TFPIP10646 304 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 CCNA2P20248 432 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 COX5AP20674 150 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 LMO1P25800 156 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 GCH1P30793 250 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 POLR2JP52435 117 aaKnown RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 FOXG1P55316 489 aaPredicted RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 CSNK2A1P68400 391 aaPredicted RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 HPCAP84074 193 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 LRRC74AQ0VAA2 488 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 CAPRIN1Q14444 709 aaKnown RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 IRF3Q14653 427 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 P2RY6Q15077 328 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 PDK3Q15120 406 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 Q5PR19 223 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 MRPL2Q5T653 305 aaKnown RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 ADAM5Q6NVV9 412 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 ZNF836Q6ZNA1 936 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 Q71RC1 249 aaPredicted RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 BHLHA15Q7RTS1 189 aaPredicted RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 VRK2Q86Y07 508 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 FUNDC1Q8IVP5 155 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 CLIP4Q8N3C7 705 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 ZNF611Q8N823 705 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 GTF2H4Q92759 462 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 NEUROG1Q92886 237 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 RADILQ96JH8 1075 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 ZBTB18Q99592 522 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 EBF4Q9BQW3 602 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 MTHFD2LQ9H903 347 aaPredicted RBP6.56□□□□□ -1.36
VMP1-213ENST00000591877 TPT1P8Q9HAU6 139 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 SLCO1B3Q9NPD5 702 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 FANCFQ9NPI8 374 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 SLC52A3Q9NQ40 469 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 NKIRAS1Q9NYS0 192 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 NLKQ9UBE8 527 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 TMED7Q9Y3B3 224 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 HDGFL3Q9Y3E1 203 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 USH1CQ9Y6N9 552 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 FN1P02751 2386 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 TLN2Q9Y4G6 2542 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 PLCE1Q9P212 2302 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 HEATR1Q9H583 2144 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 CFAP73A6NFT4 308 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 TRIM64A6NGJ6 449 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 TRIM64BA6NI03 449 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 EBAG9O00559 213 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 ARHGEF9O43307 516 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 ZNF208O43345 1280 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 KRT75O95678 551 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 IGHV3-9P01782 118 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 BCHEP06276 602 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 DBIP07108 87 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 DANCRP0C864 163 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 GKN3PP0CG01 181 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 PRG2P13727 222 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 PAX1P15863 534 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 IL7RP16871 459 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 IL32P24001 234 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MDH1P40925 334 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 SLC1A3P43003 542 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 CRATP43155 626 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MAGEA8P43361 318 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 PTH2RP49190 550 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MRPL19P49406 292 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 CENPAP49450 140 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 CLK1P49759 484 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 POLR2HP52434 150 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 OR2B6P58173 313 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 DSTNP60981 165 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 GNGT1P63211 74 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 BSPH1Q075Z2 132 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 FBXW9Q5XUX1 488 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 SLC2A7Q6PXP3 512 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 PRSS57Q6UWY2 283 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MSANTD1Q6ZTZ1 278 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MOB3CQ70IA8 216 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 YTHDF3Q7Z739 585 aaKnown RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 BIVMQ86UB2 503 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 GPAT4Q86UL3 456 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MSRB3Q8IXL7 192 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 C10orf111Q8N326 155 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 ZNF433Q8N7K0 673 aaPredicted RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 OR52P1PQ8NH57 321 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 SLC38A5Q8WUX1 472 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 HSD17B8Q92506 261 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 TMEM19Q96HH6 336 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 POTEKPQ9BYX7 375 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 ZNF701Q9NV72 531 aaPredicted RBP6.55□□□□□ -1.36
VMP1-213ENST00000591877 SLC25A37Q9NYZ2 338 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 NPAP1Q9NZP6 1156 aa6.55□□□□□ -1.36
VMP1-213ENST00000591877 MRPL15Q9P015 296 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms