RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ALPK2Q86TB3 2170 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 A0A096LPE4 126 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 IGLV1-36A0A0B4J1U3 117 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 PRSS44E7EML9 344 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 H0YAE9 185 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 DCTN6O00399 190 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 HLA-DQA2P01906 255 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 OR8G3PP0DMU2 310 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 B4GALT1P15291 398 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 PPP3CBP16298 524 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 CDAP32320 146 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 PYCR1P32322 319 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 HSPA13P48723 471 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 MRPS34P82930 218 aaKnown RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 GLO1Q04760 184 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 P2RY8Q86VZ1 359 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
VMP1-210ENST00000589823 PTP4A1Q93096 173 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 S100PBPQ96BU1 408 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 OR51V1Q9H2C8 321 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 NELFAQ9H3P2 528 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 SIAEQ9HAT2 523 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 NDRG3Q9UGV2 375 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 MOKQ9UQ07 419 aa11.95□□□□□ -0.5
VMP1-210ENST00000589823 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 PRODHO43272 600 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 MPZL2O60487 215 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 GYPBP06028 91 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 CLUP10909 449 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 MSR1P21757 451 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 FMO3P31513 532 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 CCKARP32238 428 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 CAPZA2P47755 286 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 BLVRAP53004 296 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
VMP1-210ENST00000589823 ADARB1P78563 741 aaKnown RBP11.94□□□□□ -0.5
VMP1-210ENST00000589823 EFNB1P98172 346 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 TBRG1Q3YBR2 411 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 SLC35D3Q5M8T2 416 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 TIMM23BQ5SRD1 257 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 FOXL2NBQ6ZUU3 175 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 SLC16A14Q7RTX9 510 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 SETD9Q8NE22 299 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 OR6K6Q8NGW6 343 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 FOXN4Q96NZ1 517 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 MED18Q9BUE0 208 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 HCAR1Q9BXC0 346 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
VMP1-210ENST00000589823 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 FLNCQ14315 2725 aa11.94□□□□□ -0.5
VMP1-210ENST00000589823 A1L4Q6 167 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 GLCEO94923 617 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 WNT11O96014 354 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 IL5RAQ01344 420 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 HSF2Q03933 536 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
VMP1-210ENST00000589823 IL18R1Q13478 541 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 APOFQ13790 326 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 DPPA2Q7Z7J5 298 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 C8orf59Q8N0T1 100 aaPredicted RBP11.93□□□□□ -0.5
VMP1-210ENST00000589823 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 BBS1Q8NFJ9 593 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 HTRA1Q92743 480 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 NABP1Q96AH0 204 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 SH3GL3Q99963 347 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
VMP1-210ENST00000589823 DOPEY1Q5JWR5 2465 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 SH3D21A4FU49 640 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms