RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 C8orf4Q9NR00 106 aa10.05□□□□□ -0.8
RFX1-204ENST00000588885 POFUT2Q9Y2G5 429 aa10.05□□□□□ -0.8
RFX1-204ENST00000588885 CR1P17927 2039 aa10.05□□□□□ -0.8
RFX1-204ENST00000588885 FN1P02751 2386 aaKnown RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 ARPC4-TTLL3A0A0A6YYG9 625 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 BLOC1S5-TXNDC5H3BN57 136 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 RPL36A-HNRNPH2H7BZ11 118 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 RNF13O43567 381 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 MT-ATP6P00846 226 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 GASTP01350 101 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 HLA-HP01893 362 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 CRYAAP02489 173 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 TP53P04637 393 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 CD79AP11912 226 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 CALCRP30988 508 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 RBM34P42696 430 aaKnown RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 OMPP47874 163 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 IDH3GP51553 393 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 SH3BGRP55822 239 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 PIGFQ07326 219 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 MELKQ14680 651 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 RAB35Q15286 201 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZIK1Q3SY52 487 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 KDM4DQ6B0I6 523 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 C11orf71Q6IPW1 123 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZNF544Q6NX49 715 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZNF813Q6ZN06 617 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 SLC35D2Q76EJ3 337 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 PXKQ7Z7A4 578 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZER1Q7Z7L7 766 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 MDP1Q86V88 176 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 MYPOPQ86VE0 399 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZNF184Q99676 751 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 DGCR6LQ9BY27 220 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 RIBC2Q9H4K1 309 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 B3GAT2Q9NPZ5 323 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 MEPEQ9NQ76 525 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 NANSQ9NR45 359 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 PAPOLBQ9NRJ5 636 aaKnown RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 KRT84Q9NSB2 600 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 C20orf141Q9NUB4 165 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 SMPD3Q9NY59 655 aaPredicted RBP10.04□□□□□ -0.8
RFX1-204ENST00000588885 TAS2R5Q9NYW4 299 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
RFX1-204ENST00000588885 ZNF99A8MXY4 864 aaPredicted RBP10.03□□□□□ -0.8
RFX1-204ENST00000588885 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 LY6HO94772 140 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 SNAP29O95721 258 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 PATE4P0C8F1 98 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 IFI30P13284 250 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 ANXA8P13928 327 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 B4GALT1P15291 398 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 CBR1P16152 277 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 FUT1P19526 365 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 MAKP20794 623 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 SERPINF1P36955 418 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 CSNK1A1P48729 337 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 NUDT6P53370 316 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 NAAAQ02083 359 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 ETFDHQ16134 617 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 GNPDA2Q8TDQ7 276 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 DNAJC9Q8WXX5 260 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 ULBP2Q9BZM5 246 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 TOR3AQ9H497 397 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 BARX1Q9HBU1 254 aaPredicted RBP10.03□□□□□ -0.8
RFX1-204ENST00000588885 MED31Q9Y3C7 131 aa10.03□□□□□ -0.8
RFX1-204ENST00000588885 IGHV4-30-2A0A087WSY4 118 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 SOX14O95416 240 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 IGLV1-44P01699 117 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 F13BP05160 661 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.81
RFX1-204ENST00000588885 OR4A8P0C604 315 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 FPR3P25089 353 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 IFNGR2P38484 337 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 AQP2P41181 271 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 GSSP48637 474 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 HGFACQ04756 655 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 PRKCDQ05655 676 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 MST1LQ2TV78 715 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 C6orf52Q5T4I8 152 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 C1orf94Q6P1W5 598 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 SLC46A3Q7Z3Q1 461 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 NANOGNBQ7Z5D8 188 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 LINC00471Q8N535 108 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 ZNF525Q8N782 197 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 OR13C2Q8NGS9 318 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 FANK1Q8TC84 345 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 SGTBQ96EQ0 304 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 LRR1Q96L50 414 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 RDH12Q96NR8 316 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 RHNO1Q9BSD3 238 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 ADI1Q9BV57 179 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 KATNB1Q9BVA0 655 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 GABARAPL3Q9BY60 117 aa10.02□□□□□ -0.81
RFX1-204ENST00000588885 SLC19A3Q9BZV2 496 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms