RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 C20orf196Q8IYI0 205 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 CISD2Q8N5K1 135 aaKnown RBP19.73■□□□□ 0.75
ATG4D-209ENST00000588857 OR6N2Q8NGY6 317 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 MYCBPQ99417 103 aaPredicted RBP19.73■□□□□ 0.75
ATG4D-209ENST00000588857 YIPF3Q9GZM5 350 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 WDR76Q9H967 626 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 BCO1Q9HAY6 547 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 LSM2Q9Y333 95 aaKnown RBP19.73■□□□□ 0.75
ATG4D-209ENST00000588857 TLN1Q9Y490 2541 aaKnown RBP19.73■□□□□ 0.75
ATG4D-209ENST00000588857 COL6A6A6NMZ7 2263 aa19.73■□□□□ 0.75
ATG4D-209ENST00000588857 ZNHIT1O43257 154 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 MRPL33O75394 65 aaKnown RBP19.72■□□□□ 0.75
ATG4D-209ENST00000588857 YES1P07947 543 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 HSF2Q03933 536 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 OR2G6Q5TZ20 316 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.72■□□□□ 0.75
ATG4D-209ENST00000588857 MED12LQ86YW9 2145 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 OR52N1Q8NH53 320 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 MRPL48Q96GC5 212 aaKnown RBP19.72■□□□□ 0.75
ATG4D-209ENST00000588857 TRIB1Q96RU8 372 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 MNTQ99583 582 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 MGLLQ99685 303 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF649Q9BS31 505 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 FAM192AQ9GZU8 254 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 CALHM2Q9HA72 323 aa19.72■□□□□ 0.75
ATG4D-209ENST00000588857 CAB39Q9Y376 341 aaPredicted RBP19.72■□□□□ 0.75
ATG4D-209ENST00000588857 A0A1W2PPL8 197 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 AHRRA9YTQ3 701 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF670-ZNF695F2Z2N8 137 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF593O00488 134 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-209ENST00000588857 TGM6O95932 706 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF823P16415 610 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 LAP3P28838 519 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 NTF4P34130 210 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ADAM8P78325 824 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ZNF85Q03923 595 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 SF3B4Q15427 424 aaKnown RBP eCLIP19.71■□□□□ 0.751e-7■■■■□ 20.4
ATG4D-209ENST00000588857 ZNF324BQ6AW86 544 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-209ENST00000588857 SLC26A10Q8NG04 563 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 GATAD2BQ8WXI9 593 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 ULBP2Q9BZM5 246 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 SEC61A2Q9H9S3 476 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 B3GAT2Q9NPZ5 323 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 MRPL22Q9NWU5 206 aaKnown RBP19.71■□□□□ 0.75
ATG4D-209ENST00000588857 FOXD3Q9UJU5 478 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-209ENST00000588857 CLEC4AQ9UMR7 237 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 TMEM14AQ9Y6G1 99 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 SPTA1P02549 2419 aa19.71■□□□□ 0.75
ATG4D-209ENST00000588857 GUCA1AP43080 201 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ENTPD1P49961 510 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ARMCX4Q5H9R4 360 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 PHYHD1Q5SRE7 291 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF322Q6U7Q0 402 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ADGRE4PQ86SQ3 457 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 CDC20BQ86Y33 519 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 GPR137CQ8N3F9 429 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 GP6Q9HCN6 339 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 LAMP5Q9UJQ1 280 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 CCDC160A6NGH7 325 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 MPZL1O95297 269 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 HRGP04196 525 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 SPARCP09486 303 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 GAAP10253 952 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF133P52736 654 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ACTA2P62736 377 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ACTG2P63267 376 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 C10orf128Q5T292 105 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF585AQ6P3V2 769 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 DPY19L4Q7Z388 723 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 OR10H5Q8NGA6 315 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 SNX33Q8WV41 574 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 GLRX2Q9NS18 164 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 CLCF1Q9UBD9 225 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 COPS3Q9UNS2 423 aa19.7■□□□□ 0.74
ATG4D-209ENST00000588857 FASNP49327 2511 aaKnown RBP19.69■□□□□ 0.74
ATG4D-209ENST00000588857 H3BSA7 217 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 DHHO43323 396 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 MT-ND5P03915 603 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 CD79BP40259 229 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF84P51523 738 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 MEP1BQ16820 701 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 GPR107Q5VW38 600 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 SSX6Q7RTT6 188 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 FGD2Q7Z6J4 655 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 CLVS1Q8IUQ0 354 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-209ENST00000588857 RFLNBQ8N5W9 214 aa19.69■□□□□ 0.74
ATG4D-209ENST00000588857 SPRYD4Q8WW59 207 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-209ENST00000588857 RBM24Q9BX46 236 aaKnown RBP19.69■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF462Q96JM2 2506 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 OR6C65A6NJZ3 312 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 PHYHO14832 338 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 TMCC2O75069 709 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 UPK3AO75631 287 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 KRT33AO76009 404 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 KLRB1Q12918 225 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 OTPQ5XKR4 325 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 OTOSQ8NHW6 89 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 THEM6Q8WUY1 208 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 C11orf40Q8WZ69 217 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 WNT2BQ93097 391 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms